| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1100 |
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| Symbol | prmA |
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| ID | 5711068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1128118 |
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| End bp | 1128987 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267011 |
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| Product | ribosomal L11 methyltransferase |
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| Protein accession | YP_001532443 |
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| Protein GI | 159043649 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.441785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCT ATACCGCCTA CACGACCTTG CCGGGCAAGG CGCCCGCCGA AGAGCTCGGC
GCGGCGCTGG AAACCCTGAC GCCCGTGCCC ACGGGGGTTG GTGTGTTCGA GATCGAGGAC
GGCTCCGGGC TATGGGAGGT CGGGGCATAT TTCATCGAGG CGCCGGATGA GACCGCGCTC
GCGCTGCTGG CCGCGGCCTT CGATGCCAAA CCCTTCAGCG TGTCGGAACT GCCGGAGACC
GACTGGGTGG CCAAGGTCAA GCGCGAGCTG GCGCCCGTCA CGGCGGGGCG GTTTTTCCTT
TATGGTAGTC ATGACGCCGA CAAGGTGCTT CCGGATGCGG TGCCCCTGCT GATCGAGGCG
GCGATGGCGT TCGGGACCGG GCATCACGGC ACGACCCAGG GCTGTCTGCG TGCCTTCGAT
GCGCTCCTGA GCGCTGGACA GGCGCAGGGT CCGGTGCTCG ATGTGGGGTG CGGGACGGCG
GTGCTGGCCA TGGCGGCAGC ACGGGTTTTC GACACCACGG TGGTGGCCAG CGACATCGAC
CCGGTGGCGG TGGATGTGGC CGAGGCCAAC CTGGCCGCCA ACGGCATGGC GGGCCAGGTG
ATCTGCGTGG AGGCGACCGG GCTCGATCAC CCCGAGATCG CGGGGGCAGG GCCCTTCGGC
GTGATCTTCG CCAATATCCT CAAGGGGCCG CTGATCGATC TCGCTCCGGC GATCACGGCC
GCACTCGCGC CGCAAGGGCA CGTGATTCTT TCAGGGCTTC TGAACGAACA GGCCAGTGAA
GTGATCAATG CCTACGCAGA CGCAGGATTG TCCCTGGTTG CGCGGGACGA GATCGGAGAA
TGGACCACTC TGACCCTGAA AATGCCATAA
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| Protein sequence | MPTYTAYTTL PGKAPAEELG AALETLTPVP TGVGVFEIED GSGLWEVGAY FIEAPDETAL
ALLAAAFDAK PFSVSELPET DWVAKVKREL APVTAGRFFL YGSHDADKVL PDAVPLLIEA
AMAFGTGHHG TTQGCLRAFD ALLSAGQAQG PVLDVGCGTA VLAMAAARVF DTTVVASDID
PVAVDVAEAN LAANGMAGQV ICVEATGLDH PEIAGAGPFG VIFANILKGP LIDLAPAITA
ALAPQGHVIL SGLLNEQASE VINAYADAGL SLVARDEIGE WTTLTLKMP
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