| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1076 |
|---|
| Symbol | purC |
|---|
| ID | 5711044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 1104888 |
|---|
| End bp | 1105649 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641266987 |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| Protein accession | YP_001532419 |
|---|
| Protein GI | 159043625 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
|---|
| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCC GCAAGAAGAT CTACGAAGGC AAGGCCAAGA TCCTGTATGA AGGCCCCGAG
CCCGGGACCA TCGTGCAGTA TTTCAAGGAT GACGCCACCG CCTTCAATGC CGAGAAACGG
GCGACGATCG ATGGCAAGGG CGTTCTGAAC AACCGGCTCA GCGAGTTCTT CATGACCGGG
CTGAACGGGA TCGGCGTACC GACTCATTTC ATCAAGCGGC TGAACATGCG CGAGCAGCTT
GTCCGCGCGG TGGAGATCAT TCCGATCGAG ATCGTGGTGC GCAACACGGC CGCCGGGTCG
ATCTCGAAGC GACTGGGCAT CCCCGAGGGC ACCGCCCTGC CGCGGCCGAT CGTGGAGTTC
TATTACAAGG ACGACGATCT GGGCGACCCC ATCGTCAGCG AAGAGCATAT CATCGCGTTT
CAATGGGCCA GCCAGCAGGA TCTCGACGAC ATGGTGGCGC TTGCGCTGCG GGTGAACGAT
TTCATGTCCG GCGTGATGCT GAGCGTCGGC ATCAAGCTGG TGGATTTCAA GATCGAGGTC
GGCCGGGTGT TCGAGGGCGA CTACCAGCGC CTGATCGTGG CCGACGAGAT CAGCCCCGAC
AGCTGCCGCT TGTGGGACAT CAAGACGGGC GAGAAGCTCG ACAAGGACGT GTTCCGGCGC
GATCTCGGCA ACCTGGCCGA TGCCTATACC GAGGTGGCCC AGCGGCTCGG CGTTCTGCCC
AAGAACGCCA CCCCGATGAC CAAGCCCACC CTGATCAACT GA
|
|---|
| Protein sequence | MARRKKIYEG KAKILYEGPE PGTIVQYFKD DATAFNAEKR ATIDGKGVLN NRLSEFFMTG
LNGIGVPTHF IKRLNMREQL VRAVEIIPIE IVVRNTAAGS ISKRLGIPEG TALPRPIVEF
YYKDDDLGDP IVSEEHIIAF QWASQQDLDD MVALALRVND FMSGVMLSVG IKLVDFKIEV
GRVFEGDYQR LIVADEISPD SCRLWDIKTG EKLDKDVFRR DLGNLADAYT EVAQRLGVLP
KNATPMTKPT LIN
|
|---|
| |