| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1073 |
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| Symbol | |
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| ID | 5711041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1102259 |
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| End bp | 1103038 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266984 |
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| Product | methionine synthase |
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| Protein accession | YP_001532416 |
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| Protein GI | 159043622 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.234469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAT CCGCGCAGCC CGCCGCCCGC AACGACGACA CTCTCAACCG CAATTTCCGA
CCTGTCGAGG ACATCATGGC AGACGAAGAA GACGATATCA TCCTCTCCGA GCTTTCCGAT
GACGAGCTTG TGCTGCAGAT GCATGACGAC CTCTATGACG GTCTCAAGGA CGAGATCGCC
GAGGGCGTCG AGATCCTGCT GGAGCGCGGC TGGGCCCCCT ACCGGGTCCT GACCGAAGCG
CTCGTCGCGG GCATGACCAT CGTCGGCAAC GACTTCCGCG ACGGCATCCT CTTCGTGCCC
GAGGTGCTGC TGGCGGCCAA CGCGATGAAG GGCGGCATGG CCATCCTCAA GCCGCTGCTG
GTGGAAACCG GCGCGCCGCG CATGGGCAAG ATGGTGATCG GCACCGTGAA GGGCGACATC
CACGACATCG GCAAGAACCT CGTCGCCATG ATGATGGAAG GAGCAGGGTT CGAAGTGGTC
GATCTCGGCA TCAACAACCC GGTGGAGAAC TACCTCGAAG CCGCCCAGCG CGAGCAGGCC
GATATCGTCG GCATGTCCGC CCTGCTGACC ACGACCATGC CCTACATGAA GGTGGTGATC
GACACGATGG TCGAGAAAGG CATCCGCGAC GACTACATCG TGCTGGTGGG CGGCGCGCCG
TTGAACGAGG AATTCGGCAA GGCGATCGGC GCCGACGCCT ATTGCCGCGA CGCCGCCGTG
GCGGTCGAGA CCGCCAAGGA CTTCATCCTG CGCAAGCACA ACCAGCTGGC GGCCAGCTGA
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| Protein sequence | MSQSAQPAAR NDDTLNRNFR PVEDIMADEE DDIILSELSD DELVLQMHDD LYDGLKDEIA
EGVEILLERG WAPYRVLTEA LVAGMTIVGN DFRDGILFVP EVLLAANAMK GGMAILKPLL
VETGAPRMGK MVIGTVKGDI HDIGKNLVAM MMEGAGFEVV DLGINNPVEN YLEAAQREQA
DIVGMSALLT TTMPYMKVVI DTMVEKGIRD DYIVLVGGAP LNEEFGKAIG ADAYCRDAAV
AVETAKDFIL RKHNQLAAS
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