Gene Dshi_1069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1069 
Symbol 
ID5711037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1100355 
End bp1100849 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content67% 
IMG OID641266980 
ProductFe-S metabolism associated SufE 
Protein accessionYP_001532412 
Protein GI159043618 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.801847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTGTGC TGGACCTCGG GGCGCGGGGC TCCTACCTGA AGAGCAGAAA GAGAAACGAG 
GAGCCCATGG CCACCGAAGC CTTTGAAGAG ATTGCCGATA CGTTCGAGTT CCTGGAGGAT
TGGGAGGATC GCTATCGCCA TGTGATCGAC ATGGGCAAGG CGATGCCACC CCTGGACGAG
GCGTTCCGGG TGCCGGCGAC CAAGGTCGAT GGCTGCGCAA GCCAGGTCTG GCTGCGGCCG
ATGATCGAGG GGTCGGGGCC GGAGGCGCGG TTCGATTTCC AGGGCGAGAG CGATGCGATG
ATCGTGCGCG GGCTGATCGC GGTGCTGCAT GCGCTCTATG GCGGGCTGGC GGTGCGCGAG
GTGCTGGAGG TGGACGCCCC GGCGGAGCTG GCGCGGCTGG GCCTGCACGA TCACCTGTCG
GCGCAACGCT CCAACGGGGT GCGGGCCATG GTCGAACGGG TGCGCAAGCT CGCCGCCGAA
GCGCAGGTCG CCTGA
 
Protein sequence
MFVLDLGARG SYLKSRKRNE EPMATEAFEE IADTFEFLED WEDRYRHVID MGKAMPPLDE 
AFRVPATKVD GCASQVWLRP MIEGSGPEAR FDFQGESDAM IVRGLIAVLH ALYGGLAVRE
VLEVDAPAEL ARLGLHDHLS AQRSNGVRAM VERVRKLAAE AQVA