| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1067 |
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| Symbol | sod |
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| ID | 5711035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1099165 |
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| End bp | 1099764 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641266978 |
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| Product | superoxide dismutase |
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| Protein accession | YP_001532410 |
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| Protein GI | 159043616 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0605] Superoxide dismutase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.346964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTTTG AACTTCCCGA CCTTCCCTAT GCTCACGACG CCCTGGCGTC CAAAGGCATG
TCTGCAGAGA CGTTGGAATA CCACCACGAC CTGCACCACA AGGCCTATGT GGACAACGGC
AACAAGCTGA TCGCGGGCAC CGAGTGGGAG GGCAAGTCCC TCGAGGAAAT CATCACCGGC
ACCTATGACA AGGGCGCCGT GGCGCAGAAC GGAATTTTCA ACAATATCAG CCAGTTGTGG
AACCATAACC AGTTCTGGGA GATGATGGGC CCGGGCGATG CCGGCATGCC CGGCGAGTTG
GAAAAGGCGC TGGTCGAGAG CTTCGGCTCG GTCGACGAGT TCAAGTCGCA ATTCTCCGCC
GCAGGCGCCG GGCAGTTCGG CTCGGGCTGG GCCTGGTTGG TCAAGAATTC CGACGGCTCC
CTGGCGGTGA CCAAGACCGA GAACGGTGTC AACCCGCTCT GCTTCGGCCA GACCGCGCTG
CTGGGCTGCG ATGTGTGGGA GCATTCCTAT TACATCGATT TCCGCAACAA GCGCCCGGCC
TACCTGACCA ACTTCCTCGA CAACCTGGTG AACTGGGAAA ACGTCGCATC CCGCATGTGA
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| Protein sequence | MAFELPDLPY AHDALASKGM SAETLEYHHD LHHKAYVDNG NKLIAGTEWE GKSLEEIITG
TYDKGAVAQN GIFNNISQLW NHNQFWEMMG PGDAGMPGEL EKALVESFGS VDEFKSQFSA
AGAGQFGSGW AWLVKNSDGS LAVTKTENGV NPLCFGQTAL LGCDVWEHSY YIDFRNKRPA
YLTNFLDNLV NWENVASRM
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