| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1053 |
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| Symbol | |
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| ID | 5711021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1086781 |
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| End bp | 1087698 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266964 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001532396 |
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| Protein GI | 159043602 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAACGC TCGACACCAA ATCCCCCGGC CCGGCAGACC GCCAGGCCGG GGAGACCCGC
GCGATCTGGC GCGAGCGCGC GGGCGCGTGG GCGTTCTACG TGCCGCTGGC CTTCATGGTG
GTGTTCTTCG CCCTTCCCAT GGCCCTCACG GTGGTGTTCT CGTTCTTCGA GCGCACGATG
TTCTGGATGG AGCCGGGCTT TACCCTGTTC TCCTACAATA ACTTTTTCTT CTCCGCGCGG
CTGGAGAATT TCCTCGTCTC GATGAAATAC TCCGCGCTCG CCGTGGTGAT CTGTTTCGTG
CTGGGCTTCC CGGTCGCGGT GTTCATCCGC CGCTCGATCC CGCAGGTGGC CCAGCACCGG
GTGATCCTTC TGTTCATCCT GCCCTTCATG GTGTCCGAGA TCATCCGCGT CTTCGCCCTG
CGCCCGGTGT TGCAGCGCAA CGGCCTGATC AATTCCACCC TGATGGACTG GGGCCTGATC
GACGAGCCGA TCACGGCGCT GCTCTACACC CATACGGGCG TTGTGATCGG CGAGGTCCTG
AGCTTTCTGC CGTTCATCGT GTTTGCCGGG TTCCTCGCGA TGGAGGCCGT ACCAAAGTTC
ATCTTCGAGG TCTGCGATGA TCTGGGCGTG GGCCACCGGC GTCGGTTCAC CGATATCATC
CTGCCGCTGG CGGCCCCGGG GATCTTCGCG GGGGCGGTGT TCATCTTCGT CAACGGGCTG
GGCGTGGCGC TTCTGCCCAA CATCCTCGGC GGGCCGGGGG CGGTGAATGC GGGCCTGATC
GCCACGCAGG CGATCACGGC GCTCGACTTC CCGCTGGCCA TGGCCGTGAG TGCCATCATG
ATGGCGACGC TCATGGGGCT GCTCTACATC GGGCACCGCC TGTTTGACCT GACCAAAATC
CTGACCCCGC TGAACTGA
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| Protein sequence | MATLDTKSPG PADRQAGETR AIWRERAGAW AFYVPLAFMV VFFALPMALT VVFSFFERTM
FWMEPGFTLF SYNNFFFSAR LENFLVSMKY SALAVVICFV LGFPVAVFIR RSIPQVAQHR
VILLFILPFM VSEIIRVFAL RPVLQRNGLI NSTLMDWGLI DEPITALLYT HTGVVIGEVL
SFLPFIVFAG FLAMEAVPKF IFEVCDDLGV GHRRRFTDII LPLAAPGIFA GAVFIFVNGL
GVALLPNILG GPGAVNAGLI ATQAITALDF PLAMAVSAIM MATLMGLLYI GHRLFDLTKI
LTPLN
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