| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1045 |
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| Symbol | |
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| ID | 5711013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1079051 |
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| End bp | 1079896 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641266956 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_001532388 |
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| Protein GI | 159043594 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00200106 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC CGCGCGCCCT GCGCTCGTTT CTGTTCGCCC CGGCCAACCG ACCCGCGATC
TTCGACAAGG CGCGCGGGTC GGGCGCCGAT GCGGTCTGCC TCGATCTCGA GGACGCGGTG
CCGCCGGACC AGAAGGCCAC CGCCCGCGCC CCGGCGCTGG AATGGCTGGT GCAGGCGGCG
GACCCGGGCT GCGGGGTGCG GATCAACGGG TTGCGCACGC CCGAGGGGCT GGCCGATATC
GCCGCACTCT GTGCCGCGCG CCCGGGGCCG GGCTTTGTCC TTCTGCCCAA GGTCGGCGCC
GCGGCGGAGG TGCAGATCGC CGCCGAAGCG CTGGAGGCCG CGGGCAGCGA CCTGTCGCTT
GGCGCGCTGA TCGAGACCGC CGAAGGGCTG GAGGCGGTGG CACGGATCGC GCGGGCCTCC
GACCGACTGA GCTTCCTGCT CTTCGGTGCG GTGGATCTCG CGGCCGATCT CGGCGTGGAC
GGCTCGGATG CGGCGCTCGC CTATGCCCGG GGGCGCGTGG TCCATGCGGG GCGCGCGGCG
GGGCGCCCGG TGCTCGACGT GCCCGCGCTG GATTTCCGCG ACCTGGCGGC GGTGGGCCAG
GCGGCGGCGC GCGCCAAGGC ACACGGGTTT TCCGGCAAGG CGGCGATCCA CCCGTCGAAC
ATCGCGGTGA TCAACGACGC CTTCACCCCC GGCGCGGAGG AGATCGCCGA GGCGCAAGAG
GTTCTCGCCC TGTACGAAGC ATCACCCAAC GGGCTGGCCG TGCGCAACGG CAAGCTGATC
GAGAAGCCGG TGATCCGCGC GATGGAGGCG CGGCTGGCGC TGGCGCGCGC GGCGGGGCGG
CTGTGA
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| Protein sequence | MTAPRALRSF LFAPANRPAI FDKARGSGAD AVCLDLEDAV PPDQKATARA PALEWLVQAA
DPGCGVRING LRTPEGLADI AALCAARPGP GFVLLPKVGA AAEVQIAAEA LEAAGSDLSL
GALIETAEGL EAVARIARAS DRLSFLLFGA VDLAADLGVD GSDAALAYAR GRVVHAGRAA
GRPVLDVPAL DFRDLAAVGQ AAARAKAHGF SGKAAIHPSN IAVINDAFTP GAEEIAEAQE
VLALYEASPN GLAVRNGKLI EKPVIRAMEA RLALARAAGR L
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