| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1038 |
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| Symbol | |
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| ID | 5711006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1070739 |
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| End bp | 1071509 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266949 |
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| Product | Asp/Glu racemase |
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| Protein accession | YP_001532381 |
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| Protein GI | 159043587 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3473] Maleate cis-trans isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.800252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.627671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CGCCCCCCGA TGCGCCCCCG CCCCCCGACG CCCTCGGCGA CCGCCAGAAG
ATCGGCGTCG TCGTACCCTC GACCAACACC ATCGTGCAGC CCGAGACCGA CGCGGTGCGC
GTGACCGGCG TGACCTTCCA TATCGGGCGC ATCCCGATCT CGAACAAGAA GATCTCGACC
GACAATTTCC TCGACCACGT GGCCGCCATG CGCGCCGGGA TCGAGACCGC CACGGACCAG
GTGATGACCG CCGGGGTCGA CAGCCTGATC ATGGGCGTCG CACTTGAGGC GTTCTGGGGC
GGGCTGGCCG GATCCGAGGA CCTCAAGGCG AAGCTTTCGG CCCATGCGGG CGTGCCGGTG
ATCCTCGGCT CGGACGCGGT GGCCGCGGGG CTGCGGGCGT TCGGCGCGAA ACGCATCGCC
GTGCTGACCC CGCACATGCC CAAGGGCGAC GAACAGGTGC GCAATTGGCT GACCGAGGCG
GGGTTCGAGG TGACCGCCCT GAAGGGGCTC GAATGCGCCA GCCCCCGCGC CATCGCGCAG
GTGCCCGAGG CCCGCATCCG CGCGGAGTTG CAGGCGCTGG ATGCCCCCGA GGTCGACGCG
CTGGTGCAGG TGGGCACGAA CCTTGCCGGG GCGGCGGTCT GCGCCGAGGC CGAGCGCTGG
CTCGGCAAGC CCGCCATCGC CATCAACACG GTCAGCGCCT GGGCCGCCAT GCGGCAGGCC
GGGATCGCGG ACCGGGTGCG CGGGCGCGGC CGGATCCTCG AAGACCACTA A
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| Protein sequence | MTDTPPDAPP PPDALGDRQK IGVVVPSTNT IVQPETDAVR VTGVTFHIGR IPISNKKIST
DNFLDHVAAM RAGIETATDQ VMTAGVDSLI MGVALEAFWG GLAGSEDLKA KLSAHAGVPV
ILGSDAVAAG LRAFGAKRIA VLTPHMPKGD EQVRNWLTEA GFEVTALKGL ECASPRAIAQ
VPEARIRAEL QALDAPEVDA LVQVGTNLAG AAVCAEAERW LGKPAIAINT VSAWAAMRQA
GIADRVRGRG RILEDH
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