| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1036 |
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| Symbol | |
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| ID | 5711004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1068862 |
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| End bp | 1069407 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266947 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ component |
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| Protein accession | YP_001532379 |
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| Protein GI | 159043585 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.965838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.4794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACAC GGACCCTCGA CAGGATCTAC ACCGCCGCGG GTGCGCTGGC GGGCGTCTTC
CTGGTGCTGA TCTGCGTGAT CGTCACCGCC CAGATCGTCG CCCGGCAACT CGAGACGATC
ATTCCCTCTG CCGACCAGTT TGCGGGGTTC TGCCTGGCGG CCACGTCTTT CCTGGGCCTG
GCCTACAGTT TTCGCAGCGG AAGCCATATC CGCGTGACGC TGTTCACGCA GCTGTTGCGC
GGCCCCGGCG GGCGGCTCGC GCTGATCCTG GCGCTGGCCG TGGGGGCCGC GATTGCCGCC
ACGCTGGCCT GGCACACCAG CGCCATGGTG GCGCAGAACT TCGCGCGCGG CGAGGTCACT
TCGGGCCTTG TGCCCGTGCC CCTCTGGATC CCGCAGATCG GCATGGCCCT CGGTGTGATC
CTGTTTGCCG TGGCGATCGT CGAGGATCTC GTCCGCGCGA TCCTCGGCCA CCAGACCCTG
TTCGACGCAG CGGAGCGCAA GCTCAAGGAC GCGCAGGAGG CGGGCGAGCC CGTCGACCCC
GTTTGA
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| Protein sequence | MLTRTLDRIY TAAGALAGVF LVLICVIVTA QIVARQLETI IPSADQFAGF CLAATSFLGL
AYSFRSGSHI RVTLFTQLLR GPGGRLALIL ALAVGAAIAA TLAWHTSAMV AQNFARGEVT
SGLVPVPLWI PQIGMALGVI LFAVAIVEDL VRAILGHQTL FDAAERKLKD AQEAGEPVDP
V
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