| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1035 |
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| Symbol | |
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| ID | 5711003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1067835 |
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| End bp | 1068809 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266946 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001532378 |
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| Protein GI | 159043584 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.53351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.497545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTT TCAAGACCTT CGCCGCCAGT GCCGCGGCGG CCACCCTTCT GGCGCAGGCC
ATCCCGGCCG TGGCCGAAAC CGCCTGGGAC ATGGCGACAC CCTATCCGGA TGCGGAATTC
CACACCCGCA ACATCACACA ATTCGCCGAG GACATCGCGG CGGCCACCGA TGGCGGGCTG
ACCATCACCG TCCATTCCGG CGCGTCGCTG TTCAAGCACC CGGAAATCAA GCGCGCGGTC
CAGAACCAGT TCGTGCCCAT CGGCGAGGTG CTGATGGCCA ACCTGTTCAA CGAGGATCCG
ATCTTCGGCG CGGACAACAT CCCCTTCATC GCCACCACCT ACGAGGACGC CAAGGCGCTC
TGGGATGCGC AGCGCCCTCT GGTCGAGGCC AAGCTGGCCG AGGATGGCAT CCGCCTCCTC
TATGCGGTGC CGTGGCCGGG GCAGGGGTTC TATACCAACA AGCCGCTGGA GACGGGCAGC
GACCTCGAAG GGCTGCGGTT CCGGACCTAC AACGCCACCA CCGCGCGGAT GGCCGAGCTG
CTGGGCGCCT CGCCCACCAC CATCGAGGCG GTGGAGATCC CGCAGGCGTT TTCCACCGGT
ATCGTGGATG CGATGGTCAC CTCCGGCGCC ACGGGCGCGC GCACCAAGGC CTGGGACTTC
ACGACCGAGT TCTATGACCT GCAGGCCTGG CTGCCCAAGA ACATGATCAT CGTCAACGAA
AGCGCCTTCT CCGGCCTGCC CGAGGATCAG CAGCAGGCGA TCCTCGACGC CGCCGCCGCC
GCCGAGACCC GCGGTTGGGA GATGAGCGAG AGCGTGGCGA CCGAAACCGT GGCCGAACTG
GGCGAGAACA TGACCGTGCA TGCGGCCAGT GAGGCGCTGA TGTCCGACCT TGCCGCCGTG
GGCGAGACCA TGGCCGCCGA ATGGGCCGAG AATGTTGGCC CCGATGGGCA GGCCCTGCTC
GATGCGCTGA AGTAA
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| Protein sequence | MIRFKTFAAS AAAATLLAQA IPAVAETAWD MATPYPDAEF HTRNITQFAE DIAAATDGGL
TITVHSGASL FKHPEIKRAV QNQFVPIGEV LMANLFNEDP IFGADNIPFI ATTYEDAKAL
WDAQRPLVEA KLAEDGIRLL YAVPWPGQGF YTNKPLETGS DLEGLRFRTY NATTARMAEL
LGASPTTIEA VEIPQAFSTG IVDAMVTSGA TGARTKAWDF TTEFYDLQAW LPKNMIIVNE
SAFSGLPEDQ QQAILDAAAA AETRGWEMSE SVATETVAEL GENMTVHAAS EALMSDLAAV
GETMAAEWAE NVGPDGQALL DALK
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