Gene Dshi_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1018 
Symbol 
ID5710534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1053428 
End bp1053700 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content74% 
IMG OID641266929 
Producthypothetical protein 
Protein accessionYP_001532361 
Protein GI159043567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00231491 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.683012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATGG CCCGCAGACC GCTGTCGTCA CAGGCCCGCA GGGCGCTGCG CGCGGGGATG 
CTGCGCGCCA CGATCCTCGT GCTGATCGTG ACGGCGACGG TGTCCTGGGC GCAGGCGTTC
CAGAACAGGG TCAACTGGGG CGGGCTGCTG GCGGTCTGGG CGATGGCGGC GGTGGGGTTC
GCCTGGGTCG AGCACAGGGT GCTCGCCTGC CGACAGCGCC GCGCCGCGCA GCGGGCCGCC
ACCGGGGGCT GGCGCAAACG GTCCGGCGAC TGA
 
Protein sequence
MGMARRPLSS QARRALRAGM LRATILVLIV TATVSWAQAF QNRVNWGGLL AVWAMAAVGF 
AWVEHRVLAC RQRRAAQRAA TGGWRKRSGD