| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1007 |
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| Symbol | catD |
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| ID | 5710523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1041475 |
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| End bp | 1042281 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266918 |
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| Product | 3-oxoadipate enol-lactonase |
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| Protein accession | YP_001532350 |
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| Protein GI | 159043556 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGT TCACCCGCGA CGGCGTGCGC CTGCATTACC GCGACGAAGG CCCGCGCGAC
GGGCCAGTGG TGGTCTTCGC CAACTCGCTC GGCACCGACC TGCGCCTGTG GGAGCCGATC
CTGCCCCTGC TGCCCCCGGG CTTGCGGATT GTCCGCTACG ACATGCGCGG GCACGGACAA
TCCGACGTGC CCCCCGCCCC CTACACCATG GGTGCGCTGG TCTCGGATGC CGAGGGGCTG
CTCGATCATC TGGGGATCAG GGATTGCGTC TTTGTCGGCC TCTCGATCGG CGGGATGGTC
GCCCAGGGGC TGGCGGTCAA GCGGCTGGAC CTGGTGCGCG CCATGGTGCT GTCGAACACC
GCCGCCAGGA TCGGCTCGCC CAAGCTCTGG CAGGATCGCA TCGACGGGGT CCGCGCGGGC
GGGGTCGCGG CGCTCACGGA CGCGATTCTC GAACGCTGGT TCTCCCGCGC CTTCCTCACC
GACCCGCGCC TGCCCTTTTG GCGCGACATG GTGCTGGCCA CCCCGGACGA GGGGTATATC
GGTTGCTCCG CGGCGATCTC GGGGACGGAC TTCTACACGC CGACCAGCGG GCTGCGCCTG
CCGACCCTGG GCATCGCCGG GTCCGAAGAC GGCTCGACCC CGCCGGATCT CGTGCGCGAA
ACGGTGAACC TGATCCCCGG CTCGCGCTTC GTGCTGCTGC GCCGGGCGGG CCACCTGCCC
CATGTGGAAC AGCCCGAGGC CTATGCCGAG GCGCTAACCG ATTTCCTGCG CGAAACCGGC
CATCTGGGGG CCGCGACGCC GGGGTAA
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| Protein sequence | MPEFTRDGVR LHYRDEGPRD GPVVVFANSL GTDLRLWEPI LPLLPPGLRI VRYDMRGHGQ
SDVPPAPYTM GALVSDAEGL LDHLGIRDCV FVGLSIGGMV AQGLAVKRLD LVRAMVLSNT
AARIGSPKLW QDRIDGVRAG GVAALTDAIL ERWFSRAFLT DPRLPFWRDM VLATPDEGYI
GCSAAISGTD FYTPTSGLRL PTLGIAGSED GSTPPDLVRE TVNLIPGSRF VLLRRAGHLP
HVEQPEAYAE ALTDFLRETG HLGAATPG
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