Gene Dshi_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1003 
Symbol 
ID5710519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1036698 
End bp1037711 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content72% 
IMG OID641266914 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001532346 
Protein GI159043552 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.083137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG AGATCGACCG CGAGGCCCTG CGGCGCTGGT GCGACGCACG GTTCGGGGTG 
GCGGATGCCG CGCCGGAGGT TGCCCGGATC GGCGGCGGGC AGTCGAACCC GACCTTCTAC
GTCACCCATG GCGACCGGCG GCTGGTGCTG CGCAAGCAAC CGCCCGGGCC GCTGTTGAAA
GGCGCCCATG CGGTGGACCG GGAATTCCGG GTGTTGCGCG CGCTTTGGGA CACGCCGGTG
CCGGTGCCCG AGGCGCTGGC CTTCGAGCCG GATGCGGCGG TTCTGGGCAC GCCGTTCTAC
GTGATGGCGC GGCTGGAGGG GCGGGTCTGC CCGAGCTACG CCCTGCCGGA GTTGGCGCGC
GCGGATCGCG GGGCGGCGCT GCTGTCCATG GCGGAGACGC TGGCGCGGCT GCATGCGGTG
AACCCGGAGG CGGTGGGCCT GGGGGATTAC GGGCGGCCCG GGGATTACTT CGCCCGGCAG
ATGGCGCGCT GGTCGGCGCA ATACGACGCC TCGCCCGCGC AGGTGCCCGA CCTCGACGCC
CTGCGCGACT GGCTCGCCGC GCATATGCCC GAGGATGACG GGGCGGTGGC GATTGCCCAT
GGGGATTTCC GGATGGGCAA CATGATGCTG CATCCGACCG AACCGCGGGT GATCGCCGTG
CTGGACTGGG AGCTGTCGAC CCTGGGCCAT CCGCTCGCCG ATCTGGGGTT TGCCTGCATG
GCCTGGCATT CGGCGCCGGA GGAATATGGC GGGCTTCTGG GGCTGGACCT TGCGGCCGAG
GGGCTGCCGG AGATGGACGC GTTCGTCGCC GCCTACCGCG CCGCGGCGCA GGGGGACGCG
GTTTTGCGCC CGTTCCACGT GGCCTTTGCG ATGTTCCGCT TTGCGGTGAT CTTCGTGGGC
ATCGCCGACC GGGCCGCGGC GGGGAGTGCG GCGGGGGCCG ATGCCGCGCG GCTCGCTCCG
CTGGCGGAGG CTTTCGCGCG CCGGGGGCTT GCGGTATCGA GGCTGGACTT CTGA
 
Protein sequence
MSPEIDREAL RRWCDARFGV ADAAPEVARI GGGQSNPTFY VTHGDRRLVL RKQPPGPLLK 
GAHAVDREFR VLRALWDTPV PVPEALAFEP DAAVLGTPFY VMARLEGRVC PSYALPELAR
ADRGAALLSM AETLARLHAV NPEAVGLGDY GRPGDYFARQ MARWSAQYDA SPAQVPDLDA
LRDWLAAHMP EDDGAVAIAH GDFRMGNMML HPTEPRVIAV LDWELSTLGH PLADLGFACM
AWHSAPEEYG GLLGLDLAAE GLPEMDAFVA AYRAAAQGDA VLRPFHVAFA MFRFAVIFVG
IADRAAAGSA AGADAARLAP LAEAFARRGL AVSRLDF