| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1001 |
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| Symbol | serA2 |
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| ID | 5710517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1034458 |
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| End bp | 1035408 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266912 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001532344 |
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| Protein GI | 159043550 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.261776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCACC AGGTGGTGAT CACGGAAACC ATCGACACGC GCGCCCTGTC GCGGTTCGGG
CCGGAGGTCG ACGTGATCTA TGCGCCGGAA CTGGTGGAGG ATCGCGCGGC CTGCCTCGTC
GCCGTGGCGC GAGCGGACGG GGTGATCGTG CGTAACCGCA CGCAGGTGGA CCGGCCCTTC
CTAGACGCGG CATCGCGGCT GCGGGTGATC GGGCTGCTGG GGACGGGGCT GGACAATATC
GACATGGCGG CCTGCGCCGC GCGGGGCATA TCGGTGCATC CGGCCACGGG GGCCAATACC
CGGTCGGTGG CGGAATACGT GATCACCGCC GCACTGATGC TGACCCGCCG CGCGTTCATG
TCCACGCCCG AGATGCAAGA GGGCGCCTGG CCCCGCGGCC CGCTCGGCGA GGGCGGCGAG
ATCGCCGGGC GCAAGCTGGG CCTTTATGGC TGCGGCGCCG TGGCCCAGGC GGTGGCGCGC
CTGGCCAAGC CGCTCAGCAT GACCATTCTC GGCCATGATC CGCATCTGGG TCCCGGGCAT
CCGCTCTGGA CCGAGGTGAC GCGGGTCTCG GATGCGGAGC TTCTGGCGCG GGCGGATGTG
CTGAGCCTGC ACCTGCCTCT GACGCCGGAG ACCCGCGGCA GGATCGACGC CACTGCCCTG
ACGGCGATGA AACCCGGGGC GATCCTGATC AACACCGCGC ATGGCGAGAT CGTCGATGCC
CGGGCCGTGT GCGACGCCTT GCGCCGGGGG CATCTGGGCG GCGCGGCCCT GGATGTTTTC
GAGCCGGAGC CCCTGGGCAC GCAGGACGCC GCGCGGTTCC GAGGCGTGCC CAACCTGATC
CTGACACCCC ATGTGGCGGG TGTGACCGTG GAAGCCGACA GGCGGGTCAG CGCGCTGACC
GTCGACAATG TGCGGGCGGC CCTGCTGGCC CCCGAGAAGG CCGTCTCCTG A
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| Protein sequence | MPHQVVITET IDTRALSRFG PEVDVIYAPE LVEDRAACLV AVARADGVIV RNRTQVDRPF
LDAASRLRVI GLLGTGLDNI DMAACAARGI SVHPATGANT RSVAEYVITA ALMLTRRAFM
STPEMQEGAW PRGPLGEGGE IAGRKLGLYG CGAVAQAVAR LAKPLSMTIL GHDPHLGPGH
PLWTEVTRVS DAELLARADV LSLHLPLTPE TRGRIDATAL TAMKPGAILI NTAHGEIVDA
RAVCDALRRG HLGGAALDVF EPEPLGTQDA ARFRGVPNLI LTPHVAGVTV EADRRVSALT
VDNVRAALLA PEKAVS
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