| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0992 |
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| Symbol | |
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| ID | 5710507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1017620 |
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| End bp | 1020436 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266902 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_001532335 |
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| Protein GI | 159043541 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.942343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGTA AGGCCGGATT GATCCCCGCC CCTCGGCATG TGCCGGCGTG GGATGACCTG
ACCGGACCGG AACAGATGGC CATGTTGACC GAGGTGGGTG CGGCACTTGG CCGAGGCACA
GCCGGTTTCA TCGCCTCATC CGATCACGAT CATTTCCACC TGCGGGAAGC CAGTGGCGCT
CGCCTGACAA CCGGCGGTCG CGATCCGCTC CTGCCGTTGC TCGCCGAACG GCTGGACACG
GCGCAATCAG TCGACCTTGC GATTGCTTTC GCAATGGACA GCGGCGTGGC CTTGCTTGAG
CCCTGGTTCC GGGAGCTGCT AGCGCGTGGT GGACGGCTCA GAATCGTGGT GGGCGACTAT
CTCGACACGA CCGACCCGAC GGCGTTGGCG CGCCTGCTGG ACCTGGAAGG CGCCGAGCTC
TTCGTGTTCG AAACGGGAGG CCTCAGCTTT CACCCGAAGG CCTGGCTGTT CCGTGCCGCC
GATGCGCGCG GGGCGGCGAT TGTCGGCAGC TCGAACCTGT CTCAATCGGC GCTGACCGAT
GGCGTGGAAT GGAACCTGCA TTCCGAGGAT GCAGCAGACA GCGTCGGAGC GGCCTTCAAG
GACCTGCTGG CGCGACCTGA GGTTAAACCT TTGACGGCCG CATGGGTCGA TGCCTACGCG
AAACGCCGCA GGGCGCGGCC GATGCCCGAG TTCACCGCCC GCGTCGTCGC CGAAGAAGGC
CCGCCGCCAG AGCCGCACAC GATCCAGCAG GAGGCGCTGG CGGCGCTTGC ACAAAGCCGA
TCAAAGGGCC ACCGCGCCGG GCTTGTCGTG CTGGCCACCG GGCTGGGCAA GACCTGGCTG
GCCGCCTTTG ACACGATCCG TGCGATGGCG GGCCGCATCC TTTTCGTCGC CCATCGCGAC
GAAATTCTGA CCCAAGCGAT GGCGGCCTTT CGCAAGGTCC GCCCAGACGC CAAGCTCGGC
CGCTACACGG GTGCCGAGAA AGAAGCGGAC GCGGAAATCC TCTTCGCCTC GGTCCAGACG
CTGGGCCGGA TCGGTCACCT GCGCCAATTC GACCGGGATC ATTTCGACTA CATCGTGGTC
GATGAATTCC ACCATGCCGC CGCCCGCACC TATCAGAAGC TGATCGAGCA TTTCACGCCC
GGCTTCCTGT TGGGCCTCAC CGCAACGCCA GACCGGACGG ATGGCGCCGA CTTGCTTGGC
CTTTGCAGCG AAAACCTCGT CTACGAATGC GACCTGTTTC GCGGGATCGA CGCTGGGCAC
CTGTCGCCCT TCCACTACTT CGGTGTGCCG GATGACGTGG ATTACGCACA GATCCCCTGG
CGCTCCGGCC AGTTCGATCC GACCGCACTA GACGCAGCTC TAGCCACCGA GGCGCGAGCG
CTTAACGCGC TGGACCAATA CCGCAAACGT GCAAGCGGCC CCGCGATCGG CTTTTGCTGT
TCCGTGCGCC ACGCCGACTA CATGGCCGAG TACTTTCGCA CCGCCGGGTT GAACGCAATC
GCGGTCCATT CGGGCCAAAG CTCCGCGCCG CGGGCAAGTT CCCTGGCAGC GCTCGGTCGC
GGCGAGATCG ACATCCTCTT CGCGGTCGAC ATGTTCAACG AAGGCGTGGA CGTGCCCGAG
ATCGGCACCG TCCTGATGCT ACGCCCGACC GAAAGCGCGA TTATCTGGCT GCAGCAACTC
GGCCGCGGCC TGCGCCGCGT CGAAGGCAAG GTGCTGCAGG TGATCGACTA TATCGGCAAC
CACCGCAGCT TCCTGACTAA AGTCGCGACC CTTCTGCGGG CCGGCGCAGG GGATCGCTCG
ATCTCGACCA AACTGGACGC GCTCCAGGCC GGTGAATTCC AGATGCCCAA GGGCTGCGAG
ATCACCTATG AGCTGCAGGT CATCGACATC TTGCGCAATC TCCTCCGCCC GAAGGAAGGC
GCGGCGGAGC TCGAAGCCTT CTTTGTCGAC TTCCGGGACC GGACCGGCAT CCGCCCCACG
GCTGTCGAAG TCTTCCGCAA CGGCTTCGAT CCCCGCACAT CGGGCCATGG CGGCTGGTTC
GACTTCGTCC GGGACATGGG CGACGCCTTG CCCGAACGTC CTTTCGCAAC TCACGGTCGT
CTCTTGGGTG AATTGGAACG GCCCAGGGGT TTGTCCCGAT CCGCCTTGAC CGGCTTGCGC
GACGTTGTAG CCGGGCGGCA ACCGAGCGAT GGCGCGTCAG AGCTGGCCTT CAACCCGCAC
CTGGCCCAAA GCAGCGACGG CTTTCGGCTG GCGCGACCTG ACGCTTCCGG AGAGCTGGAA
CCGCTTGTGC GCGAGTTGGT CGAATGGCGC TTGGCGGAAA CGCCAATCGT CCGCGAGGCC
GCCGAGGCGT CCGCGACCTT TGTCGGCAAG CCACAGGCTC TGGAGCTTTG GCAGCGCTAC
TACGTGCCGG ACATCGCCGA GTTCTTTGGC GAAGAGTACA AGCAAAACGT CTGGCGCACC
GGTATGAAGG CGCTGCCCGA CCGGAAGATA ATGATCCTTC TGGCAAATGT GTCGACCCAG
GACCTGACCT ACGAGAACGC GTTTCTCAGC CCGTCACGGC TGAAATGGTT CAGCCAGAAC
CAGACGCGCC AGGACAGCAA GCATGGCCGG GTCATCAGCG GTGAGGAAGG CCACGAGGTC
CACATGTTCA TCCGCCGCGG GAACAAGGTG AACGGCAAGG TCAACCCATT CATCTACTGC
GGGCAACCCA GGTTCGCCGG ATGGCAGGGT GAGAAGCCAA TTGAAGTACA ATGGGAATTG
GCTTCACCAG CACCGCGCGA GCTTTGGGCG GAGCTCGGAA TTCCAAATCA AGACTGA
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| Protein sequence | MHRKAGLIPA PRHVPAWDDL TGPEQMAMLT EVGAALGRGT AGFIASSDHD HFHLREASGA
RLTTGGRDPL LPLLAERLDT AQSVDLAIAF AMDSGVALLE PWFRELLARG GRLRIVVGDY
LDTTDPTALA RLLDLEGAEL FVFETGGLSF HPKAWLFRAA DARGAAIVGS SNLSQSALTD
GVEWNLHSED AADSVGAAFK DLLARPEVKP LTAAWVDAYA KRRRARPMPE FTARVVAEEG
PPPEPHTIQQ EALAALAQSR SKGHRAGLVV LATGLGKTWL AAFDTIRAMA GRILFVAHRD
EILTQAMAAF RKVRPDAKLG RYTGAEKEAD AEILFASVQT LGRIGHLRQF DRDHFDYIVV
DEFHHAAART YQKLIEHFTP GFLLGLTATP DRTDGADLLG LCSENLVYEC DLFRGIDAGH
LSPFHYFGVP DDVDYAQIPW RSGQFDPTAL DAALATEARA LNALDQYRKR ASGPAIGFCC
SVRHADYMAE YFRTAGLNAI AVHSGQSSAP RASSLAALGR GEIDILFAVD MFNEGVDVPE
IGTVLMLRPT ESAIIWLQQL GRGLRRVEGK VLQVIDYIGN HRSFLTKVAT LLRAGAGDRS
ISTKLDALQA GEFQMPKGCE ITYELQVIDI LRNLLRPKEG AAELEAFFVD FRDRTGIRPT
AVEVFRNGFD PRTSGHGGWF DFVRDMGDAL PERPFATHGR LLGELERPRG LSRSALTGLR
DVVAGRQPSD GASELAFNPH LAQSSDGFRL ARPDASGELE PLVRELVEWR LAETPIVREA
AEASATFVGK PQALELWQRY YVPDIAEFFG EEYKQNVWRT GMKALPDRKI MILLANVSTQ
DLTYENAFLS PSRLKWFSQN QTRQDSKHGR VISGEEGHEV HMFIRRGNKV NGKVNPFIYC
GQPRFAGWQG EKPIEVQWEL ASPAPRELWA ELGIPNQD
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