Gene Dshi_0991 details

Gene Information

• Locus tag: Dshi_0991
• ID: 5710506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: -
• Start bp: 1014095
• End bp: 1017562
• Gene Length: 3468 bp
• Protein Length: 1155 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641266901
• Product: hypothetical protein
• Protein accession: YP_001532334
• Protein GI: 159043540

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAACCA GGGAGCGGCA AGGACTGATT TCACGCTTTT TCTCGCGGGC CAGCGAGACT 
GACCGTGACG TGCGCACGAA GGAGGGACCT CCTCAATCTC GCCACGAGGC CTGGGGCGAT 
AACGCAACGC GTTCGGTCAG CGGCTTGGTC AAGTCCGTTC TACAGCAACC AAGTTGTTTG 
ATTGTGACAG GTTATCAGGA CTTCCTGTCG TCACTCACCA TTTTGCTCGA AACAATTGAA 
AACCTTGGCG AACGCCCAGA AGGCAGCATC CGCATCGTCT TTGGCTCCAA CTCCGAAACA 
CGACAGGTAT TGGGTGGCAG CGGCCGGTCA GTAGCCGAAG AAGCGCGCCA ACACTTCCTT 
GGTGCAAGGG GCTTTTCGGT TGTTGATTTG GCCGATCTGC GGGCAGTTCT TGCAATGGAT 
GCAATCGAGC GCGGAATCAT CAAGTTCCGC ATTTTCGATC CCGATCTGGC AGAAGAAAAA 
CTAGGGCGCC GTCCACCAAT GCTTCACGCG AAGCTTTTTG TAGGTGGGGA CAAGGCACTT 
TCGGGAAGTG CCAATTTCTC GATCAACGGT TTGCGCCGCA ATCTGGAATT CATGGACGAC 
GCCGATGCCT GGCCCGAACT TGCGACTGCG CGTTGCGCGG CCGCTGAGCA GTATTGGGAC 
ATGGGGCGCG ATTGGACTGA GACAGCGCTG GAAATCCTGC GAGCGCTCAT CCGCATAGTT 
TCACCCGAAG AAGCAGTGGC CAGAACGGTT CACGAAGCCG CGACCTTCAC CCCCTGGCGT 
GTCGCGGGCG AAACCAGCAC CGGACGTCCG CCTCAACCCT TCCAGGCGGA TCTTATCTAT 
GAGGCTGCAG GGACGGTCTA TGAACACGGC TTTGCCTTTG TCGAAGCGCC AACTGGTGCC 
GGGAAAACCG ACATTGGGAA ACACCTGGCA ACAGTTCTAC CGGTCAGCCA TGGGCAGACG 
GTCTTTTCCT GGGGAGAGCG CGCCGATCAA CAACGGCTTG GCTCGCTCGC TCTGATACCT 
GCCAGCGTTC TGAAGAACTG GACAACGAAC GCGCCTGCGA ACTTCAAACC GATCAAGCAC 
AGTCACCTGT CGCGGCGAGG TAAGGAGGAG ACTGCGGAAT TGGACGAGAT CAACCGGGCG 
GTCCGTTCGT CTGCATCAAT GATCGTCGAT GAAAGCCACC GACTGAGCTC GCGATACCTT 
GCACCTTCTG CACGTTCGCT TGTCTTCGAG CGCAGTCCGG CGATCTGGAC CGCCTGTTTG 
TCGGCCACGC TAATGGGAAA CCAAGGCCTG GACGGCTTGC TTGCATTCCA TGAGAAGCGC 
GCCTCGATCT ATGTGCCTCC GCCCATCACG GAGCAGATCA ACCAACACAT GGCCAAGGTT 
CGAAAGCGGG TAGAGCTCGT GCGACACTTC GACCAGATGA ACCGCCGGAT CGAAGATCAA 
AGCGTGCAGG ACGACCTGTT CGACAGCGCG AAAGCACTAC AGGTCGAAGT CAACAAAGTC 
GAACGCCAGC TAGAGACCGG CGGGCTGCAA ATCAGTGCGC TTCAGGAAGG ATTGGCCGAC 
GCCCTGGCGC CATACGTCGT GCGGCGCCAA CGGGATTGCA TTGGGGAGAG TGCGGATCGA 
AAGTCCGGCG CTTTCGTTTA CCCAACGATC CGAAGCCACC GAGAGGATAC GGCGCTGAGT 
GATCAGCAGC GCCAAATCAT TGAGCGGATC AAGGCATTGG CGGAGTGCAT TACGACTGGG 
GTCACCCTTG TGTCTGCTGA TCCCCAACGC GCTGCCCACA CAGAAATCAA ACTTCACGAC 
AAATCGCGTA TTCACATCCG GAACTTCCTC GCTTTGCTGC GCGCGTCGAT AACCTTTGCA 
CGCGAAGAAT GGGCCCGCGA GCGCGACAGT GAAGCCGATC AGCGCGGGCG AGCATCAATT 
GGAGAAAACC TAAGACGCGC CGAGAAACAG AATGCCCGCG GGATTGCCGT TCCGGATGGA 
GCGCTGCCCG AGGAAGTCGA TGCCGAAACT GAGGACAGCG AAACTCCGAT TTGCGACCGG 
ATCAGTAGGC TTCTGAATCA TCCCAACCTC GACAGCATTG ATGAATCCCG GGCCGGCGTC 
ATGCGAGACA TCCTTCGAAA GCATGGCCAT GCCATCTTTC TTGCTGAGCG GGTCGGCGTG 
CTCGAGGTCT ATGCCAGGCT TCTTGCTGGG CATCGCGGAA GAGGACCCGA AGTCTTCGTG 
GTCGCACCTG GTGCACGGAT CAAGACCGGT AAGAAGCTGC ATCACATCCG ATCGGGAGCA 
GATGCGCAGG AGTATTTCGG CATCGATGGG AAACATGTCG ACCCGCTAAA GCCACGGGCC 
ATGTTCCTCA CATTCCAGAT GGCGGAAGGG ATCAACCTCC AAATCGCCTC TGCACTTGGG 
ATCATTGGCG TCACGTCCGA CGTCAAGAGC CTCATTCAGG GGTTGGGCCG GATCGACCGG 
ATCGACAGTC CCAATTCCCG CATCCACTAC TACACCTTCG ACCTGCCCGG GCTGGTTCTG 
TCATCGGATC ACAAGGCGCG CGCTCGTGTC GCCAGCATCG CTCTCCTGTC AGGTGTTGGC 
GCCGCAGACG TACCATCAGA GCTGGTTGAG TTTTCTGCCG GTGATCTGAC CGATCTTGTT 
CTCGAACAGG TCAAGAAACC GCGCATCCTC CGTTCCAACA ACTACTTCGA CCAGTTGGAA 
GCTCTTCGGC GTGTATTGCC AGCTGACGTT CTGGGCCGGG TCTGGAACGC AAAACCTCGC 
GGTCTCTGGG GAGCCGAACT CTGCCTTCTG TCCTCAGTTG AACCAAACAC CGTCCTCCTC 
TTGGGCGGTC GCACAGGCAG CCCCCAAGAT CCTACTGTCC TACCGCCTCG CTTGATTGCC 
GTTCGAGATG TCGATGGGCG CGCAGAGATC ATTGGCGACC AGGTTGAAGC GGCTAGGCTC 
CTATCCGCCG CCTATGCCGA AACGCGCCGC CGAGGCATGC AAAGCCACCG CCCAGAACTG 
AACGCGATAT CCGCTACGTT CAGCCGTCTC GGCAGCACCC TTGCGCATCT GACCCACTGG 
GATGTTCGGC CAGCTCGAAC GGTTTCACTT CTTTCCTCTC TCGCTAATTT TCTGTCAGGC 
CACGACACAG GTGATGCTGG TCAAGGGCTC TTCGGTTCCT TAACTCTGCC GACGCTGGAA 
AAGCTGGCAG AAGCCTGGGC ACACGAACTC GATGTTTTCT GGATCGAGGC GAAGGAGACG 
GTTAGCCAAA GGAGTGCGTC TGGCGGCGAA ATACCCGACT ACCTCGGGAT CGACGCGATC 
TGCCGAGCTT TCCAAGAACA GCCAGACGAT GTCCGCTCGG CTGTAAGTGA AAGGATGAAG 
GAGCTCTTGG CTCGGTGCAC GGCATTGTCA GAGGGGCAAT CGATCGATGT ACTGAGCCGG 
GTTGCCGTCA TTTTTGAAGT CGAGCCTGAC CGCAGACTAG GCCGTTGA 

 

Protein sequence

MGTRERQGLI SRFFSRASET DRDVRTKEGP PQSRHEAWGD NATRSVSGLV KSVLQQPSCL 
IVTGYQDFLS SLTILLETIE NLGERPEGSI RIVFGSNSET RQVLGGSGRS VAEEARQHFL 
GARGFSVVDL ADLRAVLAMD AIERGIIKFR IFDPDLAEEK LGRRPPMLHA KLFVGGDKAL 
SGSANFSING LRRNLEFMDD ADAWPELATA RCAAAEQYWD MGRDWTETAL EILRALIRIV 
SPEEAVARTV HEAATFTPWR VAGETSTGRP PQPFQADLIY EAAGTVYEHG FAFVEAPTGA 
GKTDIGKHLA TVLPVSHGQT VFSWGERADQ QRLGSLALIP ASVLKNWTTN APANFKPIKH 
SHLSRRGKEE TAELDEINRA VRSSASMIVD ESHRLSSRYL APSARSLVFE RSPAIWTACL 
SATLMGNQGL DGLLAFHEKR ASIYVPPPIT EQINQHMAKV RKRVELVRHF DQMNRRIEDQ 
SVQDDLFDSA KALQVEVNKV ERQLETGGLQ ISALQEGLAD ALAPYVVRRQ RDCIGESADR 
KSGAFVYPTI RSHREDTALS DQQRQIIERI KALAECITTG VTLVSADPQR AAHTEIKLHD 
KSRIHIRNFL ALLRASITFA REEWARERDS EADQRGRASI GENLRRAEKQ NARGIAVPDG 
ALPEEVDAET EDSETPICDR ISRLLNHPNL DSIDESRAGV MRDILRKHGH AIFLAERVGV 
LEVYARLLAG HRGRGPEVFV VAPGARIKTG KKLHHIRSGA DAQEYFGIDG KHVDPLKPRA 
MFLTFQMAEG INLQIASALG IIGVTSDVKS LIQGLGRIDR IDSPNSRIHY YTFDLPGLVL 
SSDHKARARV ASIALLSGVG AADVPSELVE FSAGDLTDLV LEQVKKPRIL RSNNYFDQLE 
ALRRVLPADV LGRVWNAKPR GLWGAELCLL SSVEPNTVLL LGGRTGSPQD PTVLPPRLIA 
VRDVDGRAEI IGDQVEAARL LSAAYAETRR RGMQSHRPEL NAISATFSRL GSTLAHLTHW 
DVRPARTVSL LSSLANFLSG HDTGDAGQGL FGSLTLPTLE KLAEAWAHEL DVFWIEAKET 
VSQRSASGGE IPDYLGIDAI CRAFQEQPDD VRSAVSERMK ELLARCTALS EGQSIDVLSR 
VAVIFEVEPD RRLGR