Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0981 |
Symbol | |
ID | 5710495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1002333 |
End bp | 1002788 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641266890 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001532324 |
Protein GI | 159043530 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.784377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCTTCC CCTCCTCGGT GCTGTTCTGC TGCGATCACA ACGCGATCCG CTCGCCCATG GCCGAGGGCA TGATGAAGAA ATACTACGGC CAGCGCGCCT ATGTGCAATC GGCCGGAGTG AAGAACGATC TCGACATCGA CGGCTTTGCC GTCACCGTCT GCAGCGAGAT CGGCGTGACG CTGGACGCCC ATCGCACCCG ATCCTTCGAG GACATGCAGA ATTGGGGCGA CGATCTCTCG TCCTTCGATC TGATCGTGGC CCTCTCGCCG GCCAGCCAGC GTCAGGCCCT CGAACTGACC CGGCTCTTTC ACCTGACGGT CGAATACTGG CCGATCATGG ATCCCGTCGG CATTGCCGAG GGCCGGGAGG CCAAGCTGCG CGCTTATCGG CAGACCCGCG ACCAGATCCG GGAGCGGATG CTGGACCGGT TCGGGCCGGC CCAAGTCGAA CCGTGA
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Protein sequence | MAFPSSVLFC CDHNAIRSPM AEGMMKKYYG QRAYVQSAGV KNDLDIDGFA VTVCSEIGVT LDAHRTRSFE DMQNWGDDLS SFDLIVALSP ASQRQALELT RLFHLTVEYW PIMDPVGIAE GREAKLRAYR QTRDQIRERM LDRFGPAQVE P
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