Gene Dshi_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0981 
Symbol 
ID5710495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1002333 
End bp1002788 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content64% 
IMG OID641266890 
Productprotein tyrosine phosphatase 
Protein accessionYP_001532324 
Protein GI159043530 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.784377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTTCC CCTCCTCGGT GCTGTTCTGC TGCGATCACA ACGCGATCCG CTCGCCCATG 
GCCGAGGGCA TGATGAAGAA ATACTACGGC CAGCGCGCCT ATGTGCAATC GGCCGGAGTG
AAGAACGATC TCGACATCGA CGGCTTTGCC GTCACCGTCT GCAGCGAGAT CGGCGTGACG
CTGGACGCCC ATCGCACCCG ATCCTTCGAG GACATGCAGA ATTGGGGCGA CGATCTCTCG
TCCTTCGATC TGATCGTGGC CCTCTCGCCG GCCAGCCAGC GTCAGGCCCT CGAACTGACC
CGGCTCTTTC ACCTGACGGT CGAATACTGG CCGATCATGG ATCCCGTCGG CATTGCCGAG
GGCCGGGAGG CCAAGCTGCG CGCTTATCGG CAGACCCGCG ACCAGATCCG GGAGCGGATG
CTGGACCGGT TCGGGCCGGC CCAAGTCGAA CCGTGA
 
Protein sequence
MAFPSSVLFC CDHNAIRSPM AEGMMKKYYG QRAYVQSAGV KNDLDIDGFA VTVCSEIGVT 
LDAHRTRSFE DMQNWGDDLS SFDLIVALSP ASQRQALELT RLFHLTVEYW PIMDPVGIAE
GREAKLRAYR QTRDQIRERM LDRFGPAQVE P