| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0979 |
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| Symbol | hisD |
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| ID | 5710493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1000537 |
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| End bp | 1001853 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266888 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_001532322 |
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| Protein GI | 159043528 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.968374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGT TCCTGTCCAG CGCCGAGGCC GGCTTCGAGG CCGCGTTCGC ACAGCTTCTG
ACCATGAAGC GCGAGGATGC GGTGGATGTG GACGACACGG TCGCGGGAAT CATCGCCGAT
GTCCGCGCCC GGGGCGATGC GGCGGTGATC GAGCTGACGT CCCGGTTCGA CCGTCTGACG
TTGACACCGC AGACCCTCGC GTTCAGCGCC GAAGAGATCG CGGCGGAAAT CGCGAAAGTA
TCCGAGGAAG ACCGCGCAGC GCTTGAACTG GCCGCGGAAA GGATCCGCGC CTACCACGCG
CGCCAGATGC CGCAGGATGC CCGCTGGACC GAGCCCACGG GGGCTGAACT CGGCTGGCGC
TGGACCCCGG TTTCGGCAGC AGGGCTTTAT GTGCCCGGTG GGCTGGCAAG CTACCCCTCC
AGCGTGCTGA TGAACGCGAT CCCGGCCCAG GTGGCAGGGG TTGAGCGGCT GGTGATCTGT
GCGCCGACCC CGGACGGGGT GGTCAACCCG CTTGTCCTGC TGGCGGCCAG CTTGTCGGGT
GTCGACACCG TATACCGGGT CGGCGGGGCG CAGGCGATCG CCGCGCTGGC CTATGGCACC
GAGACCATCG CGCCGGTCGA CAAGATCACC GGGCCCGGCA ATGCCTTCGT GGCGGCGGCC
AAGCGGCGCG TGTTCGGGCG GGTGGGGATC GACATGATCG CGGGTCCGTC CGAGATCCTC
GTGATCGCTG ATCGCGATAA CGACCCTGAC TGGATCGCGG TGGACCTGCT CAGCCAGGCC
GAGCATGACG AAAGCGCCCA GTCTATCCTG ATCACCGACG ATGCCGCCTT CGGACAGGCC
GTGGCTGCGG CGGTCGAGGC GCGGCTCGAA ACGCTGGAGC GGCGCGCCAT TGCGGGGCCG
AGCTGGCGGG ATTTCGGCGC GGTGATCACC GTGCGCGACC TGGCCGAGGC GGCGGAGTTG
TCCAACCGTA TCGCACCCGA GCACCTGGAG CTGTGCGTCG CGGACCCTGA CGGGCTCGCC
GAACACATCA CCCATGCCGG GGCGATCTTT CTCGGGGCGT GGACGCCCGA GGCCATCGGT
GACTATATCG GTGGACCCAA TCACGTTCTG CCAACCGCGC GCTCGGCGCG CTTCTCCTCG
GGCCTGTCGG TGATGGATTT CGTCAAACGC ACGACACTTG CCAAAATGAC CCCCGCCGCC
CTCGCCGAGA TCGGCCCGGC GGCCGAACGC CTTGCGATTT CCGAAAGCCT CGAGGCCCAT
GGCCTGAGCG TGCGCGCCCG GCTCGACCGG CTCAACAGGG GGGAGGCCGC GGAATGA
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| Protein sequence | MPLFLSSAEA GFEAAFAQLL TMKREDAVDV DDTVAGIIAD VRARGDAAVI ELTSRFDRLT
LTPQTLAFSA EEIAAEIAKV SEEDRAALEL AAERIRAYHA RQMPQDARWT EPTGAELGWR
WTPVSAAGLY VPGGLASYPS SVLMNAIPAQ VAGVERLVIC APTPDGVVNP LVLLAASLSG
VDTVYRVGGA QAIAALAYGT ETIAPVDKIT GPGNAFVAAA KRRVFGRVGI DMIAGPSEIL
VIADRDNDPD WIAVDLLSQA EHDESAQSIL ITDDAAFGQA VAAAVEARLE TLERRAIAGP
SWRDFGAVIT VRDLAEAAEL SNRIAPEHLE LCVADPDGLA EHITHAGAIF LGAWTPEAIG
DYIGGPNHVL PTARSARFSS GLSVMDFVKR TTLAKMTPAA LAEIGPAAER LAISESLEAH
GLSVRARLDR LNRGEAAE
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