Gene Dshi_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0943 
Symbol 
ID5710634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp968525 
End bp969388 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID641266854 
Productabortive infection protein 
Protein accessionYP_001532289 
Protein GI159043495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.219261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCTGCT CAGAAAATCG GCAAGAGGCA TTGCTCGGGG CCGGGCATCT CGTTGCGTTC 
CTTGTCATCA CCTTCGCAAT CACCTGGAGC GTGATTGGTG CCTACATCTT TTGGCCCGAG
GCCATGGCGG CGCGGTTCGG CGCGATCAGC GGCCGCCATC CACTCTATTT CCTGGCGACC
TGGGCCCCGG CGATCTCGGC CATCTTGCTG GTTCTGTTCG CCGCCGGGTT TGGCGGTCTG
CGGAGGTTTC TCTCCCGCCT GTTGCTGTGG CGCTGCCCGC CGATCTGGTG GGCGCTCATT
CTGCTCGGCC TGCCGCTCGT TTTCATTGCC GGGTCGCTGA TCAAGGGCGG TCCGCTGCTG
ACACCGCGCC CCCCGGAGGG CGCGGGGCCG CTGGTGGCGT TGATGGTCAT GATGGTGTTC
CTCGGCCCGG TGGAGGAGTT GGGCTGGCGG GGCATGGCCA TGCCGCTCTT GCAGCGCCAT
GTGGCCCCTT TCTGGGCGGG CGCAGCGATC GGTACGGCCT GGGGCATCTG GCACCTGCCG
GCCTTCTATC TCGCCGGGGT GGTCTATGAG AACTGGAGCT TCCTGCCCTT CCTGATCGGC
AACATCACCC TGGCAATCCT CGTCACGCCG ATCTTCAACG CCGCGCGGGG AAGCCTGCTG
CTGCCGGTGC TGTTTCACTG GCAGTTGATC AACCCGTTCT GGCCCGACGC ACAGCCCTGG
GACACCTGGT TGCTGGTTGT GATCACGGCG GGCGTTGTGT GGTGGACCCG GGGGACGATG
TTCACGCGGC GAGGGGCGGT GACGGCGGTC CTCCCGGACG CGGCGCGCGA CCGGGCCGAG
CCATGGCAGG ATCCGCGCCG ATAG
 
Protein sequence
MACSENRQEA LLGAGHLVAF LVITFAITWS VIGAYIFWPE AMAARFGAIS GRHPLYFLAT 
WAPAISAILL VLFAAGFGGL RRFLSRLLLW RCPPIWWALI LLGLPLVFIA GSLIKGGPLL
TPRPPEGAGP LVALMVMMVF LGPVEELGWR GMAMPLLQRH VAPFWAGAAI GTAWGIWHLP
AFYLAGVVYE NWSFLPFLIG NITLAILVTP IFNAARGSLL LPVLFHWQLI NPFWPDAQPW
DTWLLVVITA GVVWWTRGTM FTRRGAVTAV LPDAARDRAE PWQDPRR