Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0929 |
Symbol | |
ID | 5710620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 952573 |
End bp | 953553 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641266840 |
Product | UspA domain protein |
Protein accession | YP_001532275 |
Protein GI | 159043481 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGG GACCGGGCAA ACCGCGGAAG ATCCTGGCGG TCGCGGACGC GAGCGAGGTG CAGATCGCCC TCCAGAGCGC GCTGACGCTG GCCGATACGC TGGGCGCTTC GCTTGAGGTT ATTGCCTGCG TGGAACCCCC GCATGATCTC TCCATCCTCT CCCGCTTATC TGGTGAGGAT CCCGGCAGGT TGATCGAAGA AGCCGTCGAG CGGACCCGCG AGGAGGTTCG TGCAAGGCTG GATGCGACTA TGCATGACAC CCCACTCGAC CTCTCCGTGG CGGTTGGCAA AGCCTACCTG GAGATCATCC GGCACGTCGC CAGATCGGAA TGCGATTTCG TCGTCAAGAA GGCCGAACCG CTCTCCGGGA TCGACCGTTT CCTCTTCGCC AGCACCGACC AGCATCTGCT GCGCAAGTGC CCATGCCCTG TGTGGCTGCA GACACCGACG GCATCCAAGA GCCCCAGGCG CGTTCTGGCT GCGGTCGATC TGGATGTCTG GGACGCAGCT GAGCCGGAGA CGCTGGCGGC TTTGAACCGG CGCGTGGTCG CTGCGGCCTG CATGGTCGCG GATGCACCGG ACGCCGAGGT CATTGTTCTC CACGCCTGGG AAGCCATCGG CCAGGGCATG ATCTGGGCGT TTTCCGGTGA GAGCGATGCA CGCATCTCCG CCGATCGGTA CGTCAACGAA ATCCTCGACG CCCGGCACGA TGCGATGAAC AAGTTCCTTG CGCAGGTCCG AACAGAAATA GGCCAAGGGC CCCGACTGCT TCCGCGCCTG GCGCGGGGGG CGCCGGAGAC GGTGATACAT GACCAAAGCC GACAGCTTGC CGCCGAACTC GTCGTGATGG GCACCGTGGC GCGGACCGGG CTGAGCGGCG TGTTCATCGG CAACACGGCG GAGAACATCA TCAACAGCCT CGAATGTCCG GTCCTCGCCG TGAAGCCCGA TGGCTTCGTT AGTCCACTCC TGCGCGGGTG A
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Protein sequence | MTTGPGKPRK ILAVADASEV QIALQSALTL ADTLGASLEV IACVEPPHDL SILSRLSGED PGRLIEEAVE RTREEVRARL DATMHDTPLD LSVAVGKAYL EIIRHVARSE CDFVVKKAEP LSGIDRFLFA STDQHLLRKC PCPVWLQTPT ASKSPRRVLA AVDLDVWDAA EPETLAALNR RVVAAACMVA DAPDAEVIVL HAWEAIGQGM IWAFSGESDA RISADRYVNE ILDARHDAMN KFLAQVRTEI GQGPRLLPRL ARGAPETVIH DQSRQLAAEL VVMGTVARTG LSGVFIGNTA ENIINSLECP VLAVKPDGFV SPLLRG
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