| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0914 |
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| Symbol | thiO |
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| ID | 5710604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 935813 |
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| End bp | 936790 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641266824 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_001532260 |
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| Protein GI | 159043466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.173839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCA TCGCCATCCT CGGCGCGGGC ATCGCGGGCC TCTGCGTCGC GACCGAACTG
GCCGCCCGCG GCGCGCAGGT CACTCTGCAC GACCCCGCTG GCCCGCCCGG CGCGCATCAC
TGCTCCTGGT GGGCGGGGGG GATGCTGGCG CCCTGGTGCG AATACGAGAA CGCCGAGGAG
CCGGTGCTGA TCCACGGGCA GGAGGCGCTC GACTGGTGGG GCGTGCGCAC AACCGTCACC
CGCCGCGGCA CGCTGGTGGT GGCGGCGCCC CGCGACCGGC GCGACCTCGA CCGCTTCGCC
CGCCGCACCC ATGGCCACCG CCCGGTCACC GCCGACGAGA TCGCCACGCT GGAACCCGAT
CTCGGCGCGC GCTTCCCCGC AGGCCTGTTT TTCGAAGGCG AGGCCCATCT CGACCCCCGC
CGCGCCCTGC AAGACCTCGC CGACGCGCTC GCCGCCCAAG GCATCCCGAT CCGCCCCGGC
CCGGCCCCCG CCGAGGCCCG CGTCGTCAAT TGCACCGGCC TCGCCGCCCG CACCACCTTG
CCCGGGCTGC GCGGCGTGAA GGGCGAGATG CTGGTGCTGC GTGCCCCCGA CATCCGCCTC
ACCCGGCCCA TACGCCTGCT GCACCCGCGC ATCCCGCTCT ACATCGTGCC GCGCGGGGAC
GGGGTCTACA TGCTCGGCGC CACCATGGTG GAGGCCGAGG ATCGCGGCCG CATCTCCGCC
CGGGCCATGC TGGAGCTGCT CAGCGCGGCC TACGCGCTCA ACCCCGCCTT CGCAGAGGCC
GAGATCCTCG AGATCGGCAC CGACCTGCGC CCGGCCTTCC CCGACAACCT GCCCCGCGTC
ACGCGGCAAG GCGATGTCAC CCATGTGAAC GGGCTCTACC GCCACGGCTA CCTGATGGCC
CCGGCGCTCG CCCGCGAAAC CGCCGACGCC CTGCTCGGCC CCGCCCCGAC GGAGACCCCC
CATGCAGCTC ATCATTAA
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| Protein sequence | MTPIAILGAG IAGLCVATEL AARGAQVTLH DPAGPPGAHH CSWWAGGMLA PWCEYENAEE
PVLIHGQEAL DWWGVRTTVT RRGTLVVAAP RDRRDLDRFA RRTHGHRPVT ADEIATLEPD
LGARFPAGLF FEGEAHLDPR RALQDLADAL AAQGIPIRPG PAPAEARVVN CTGLAARTTL
PGLRGVKGEM LVLRAPDIRL TRPIRLLHPR IPLYIVPRGD GVYMLGATMV EAEDRGRISA
RAMLELLSAA YALNPAFAEA EILEIGTDLR PAFPDNLPRV TRQGDVTHVN GLYRHGYLMA
PALARETADA LLGPAPTETP HAAHH
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