| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0911 |
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| Symbol | thiE |
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| ID | 5710601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 934241 |
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| End bp | 934840 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266821 |
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| Product | thiamine-phosphate diphosphorylase |
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| Protein accession | YP_001532257 |
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| Protein GI | 159043463 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.307572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC TGCATCCGTT CTACCCGATC TTCGACCGCG CCGAATGGCT GATCCGCCTG
CTGCCGCTGG GGATCAAGCT GGTGCAACTG CGCGTCAAGG ACCAGCCGCC CGAGGTGATC
CGGGCCGAGA TCCGCGCCGC CAAGGGGCTC TGCGCCGAAC ATGGCTGCAC CCTGGTGGTC
AACGATCACT GGCAGATGGC GATTGCCGAG GGCTGCGACT GGGTCCACCT GGGACAGGAA
GACCTCGACA CCGCCGATCT GGGCGCCCTG CGCGCCGCCG GGATTAAGCT GGGCATTTCC
ACCCATGACG AGGCCGAACT GGACCGCGCG CTGGCCTGCA AGCCTGCCTA CATCGCGCTC
GGCCCGATCT ATCCCACCAT CTTGAAGAAG ATGAAGTGGG AGCAGCAAGG CATTGAAAAG
CTGACGGAAT GGAAGTCCCG GATCGGGGAT GTTCCGCTGA TCGCCATCGG CGGGATGACT
CCCGACCGCG CGCCCGGTGC ACTGGCCGCC GGGGCCGATG TGGTCTCTGC CGTCACCGAT
ATCACCCTGA ACCCCGACCC CGAAGCGCAG GTGCGCCGCT GGCTGGAGGT GCTGGGATGA
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| Protein sequence | MSALHPFYPI FDRAEWLIRL LPLGIKLVQL RVKDQPPEVI RAEIRAAKGL CAEHGCTLVV
NDHWQMAIAE GCDWVHLGQE DLDTADLGAL RAAGIKLGIS THDEAELDRA LACKPAYIAL
GPIYPTILKK MKWEQQGIEK LTEWKSRIGD VPLIAIGGMT PDRAPGALAA GADVVSAVTD
ITLNPDPEAQ VRRWLEVLG
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