Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0908 |
Symbol | |
ID | 5710598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 931652 |
End bp | 932350 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641266818 |
Product | transcriptional activator |
Protein accession | YP_001532254 |
Protein GI | 159043460 |
COG category | [K] Transcription |
COG ID | [COG0819] Putative transcription activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.156653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTT CGGGGACCGG CTACGGCACC GCGGTCACCG CCTGGCGTGC GGCGGCCCCG GACTGGGACG CCTACACCCG CCACGCCTTC GTCGAGGGCC TGCGCGACGG CACCCTGCCG CGCGCGGCCT TCCTGCACTA CCTCGCGCAG GACTACGTGT TCCTGAAACA CTTCTCCCGC GCCTGGGCGC TGGCGATCGT CAAGGCCGAC ACCCTTCCCG AGATGGAGGC GGCGACAGCC ACGGTTCATG GCCTGCTTCA TTACGAGATG GGGCTGCATG TGAAGATCTG CGCCGAGGCC GGGATCGACG CCGAAACCCT CGCCGCCACG CCTGAGCATC CGGGCAACAT GGCCTATACC CGCTACGTGC TGGAGGCCGG GTATTCGGGC GATTTCCTCG ATCTTCTGGC GGCGCTGGCC CCTTGTGTGC TGGGCTATGG CGAGATCGGC GCGCGGCTCG CGGCCGAGGC GACGTCCGAC ACCTATGGCG ACTGGATCGG GACCTATGCG GGCGACGACT ACCAGGGGAT TTGCCGCGAT GTGGGCGCGC TGATCGACGG GGCGCTGACC CATCGGCTCG GCCCGGATTA CGCGACCCTG CCGCGGTTTG CGATGCTGTC GGCCCGGTTC GCCCAGGCCA CGACGCTGGA GGTCGGTTTC TGGGACATGG GGCTCAGCCC CAGCAGCGCC CCGGCGTGA
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Protein sequence | MSSSGTGYGT AVTAWRAAAP DWDAYTRHAF VEGLRDGTLP RAAFLHYLAQ DYVFLKHFSR AWALAIVKAD TLPEMEAATA TVHGLLHYEM GLHVKICAEA GIDAETLAAT PEHPGNMAYT RYVLEAGYSG DFLDLLAALA PCVLGYGEIG ARLAAEATSD TYGDWIGTYA GDDYQGICRD VGALIDGALT HRLGPDYATL PRFAMLSARF AQATTLEVGF WDMGLSPSSA PA
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