| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0902 |
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| Symbol | |
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| ID | 5710592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 925019 |
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| End bp | 926218 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266812 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_001532248 |
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| Protein GI | 159043454 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.082954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC TGGCGAGCCT CGCACTGAAG GACCTGCTGC GCGAGCGGAT GCAATTGCTG
TGCAACGTGG CGGTTCTGGC CGGGGTTCTG GTGCCTCTGC TGGTGCTGCT GGGGGTTAAG
AACGGGGTTT ATGACGCGTT GATCGGGCGG CTTCTGTCGG ATCCGGCCGC GTTGCAGATC
GACACGTCAG GCAACCAGAG CTTCCGCGCC GAGGACGCCG AAGAGGTCCG CGGCTGGCCC
GAGGCCGGGT TCGTGACCCT GAAAACCCGG TCCCTGTTCG ATTTCGTCAA CGTGCGGGAG
GTCGGCGGGC GCGGCAAGCG CGACGCGATC CTCGTGCCCT CCGGCACCGG TGATCCGACC
CTTGACGGGC GGACCCTCGG GCCGGGGGAG GCGATCCTGA GCGCGGGGCT GGCCGAGCAG
CTGTCCCTCG CCGCGGGCGC CGAGATCCAG GTCATCACCC AGGCCAGCGA CCGGCCACGG
CAACTGGCAC TGCCGCTGAC CGTGGTCGCG GTCCTGCCGC CGGAGCGGCT CGCCGGGCGC
GCAGTGCTGA CCGACATCGC CGTGCTCGAC CTGGTGGAGG CGTTCTACGA CGCCTATGCC
CTGCCTGAAT ACGGCATCGC CCAAGGTCGC GATATGGCCG AGCGGGTCGC GGATTTCGAA
GGGATGCGCG TCTTCGCGCG GGATCTGACC CTGCTTGCCC CGCTGCAAAC CCGCATCGAG
CAACGCTTCA ACATCCGGAC CGAGGCCCGC ACGGCGGAGG TGGCAGGGGT GCTGAACCTC
GGGCGCAATC TCGACCTTGC GCTGGTGCTG ACGGCATCGG TGGCCAGCAT CGGGCTCGCG
GCGGCGCTGG TCTTCGGCTT CTGGTCCGAG GTGGCGCGCA AGCGGCGGGT CCTGGCGACA
CTGGCGCTGA TGGGGCTGCC GGCGGCCTCG CTCTGGGTGT TTCCGGTGAT CCAGGCGCTG
GCCTGCGGGC TGATCGGGCT TGCGGTGTCT TTCGGCCTGT TCCTCGGGGC GGCGCGGGTG
GCCGAGGCCC TGTTTGCAGG GGGCATGCCC GAAGGGCAGC GTCTCGTGAC CCTGTCGCTG
GTCGAAGTCG GGATCATATG CGCGGGCGTG CTGGTCTTCG TGACCGCCAC GGCCCTTTTT
GCGGCGCGCG CGGCGGCCAG GGCGGACCCG GCCTCGGTCC TGCGGGAGGG GGCGGCATGA
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| Protein sequence | MKLLASLALK DLLRERMQLL CNVAVLAGVL VPLLVLLGVK NGVYDALIGR LLSDPAALQI
DTSGNQSFRA EDAEEVRGWP EAGFVTLKTR SLFDFVNVRE VGGRGKRDAI LVPSGTGDPT
LDGRTLGPGE AILSAGLAEQ LSLAAGAEIQ VITQASDRPR QLALPLTVVA VLPPERLAGR
AVLTDIAVLD LVEAFYDAYA LPEYGIAQGR DMAERVADFE GMRVFARDLT LLAPLQTRIE
QRFNIRTEAR TAEVAGVLNL GRNLDLALVL TASVASIGLA AALVFGFWSE VARKRRVLAT
LALMGLPAAS LWVFPVIQAL ACGLIGLAVS FGLFLGAARV AEALFAGGMP EGQRLVTLSL
VEVGIICAGV LVFVTATALF AARAAARADP ASVLREGAA
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