| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0895 |
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| Symbol | |
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| ID | 5710585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 912355 |
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| End bp | 914220 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641266805 |
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| Product | peptidase S1 and S6 chymotrypsin/Hap |
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| Protein accession | YP_001532241 |
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| Protein GI | 159043447 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.693546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.575051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACT ATTTCCTCGT CAAGACCCCG CTCACGCTGG AGAACTGCCT GTCCCATGAC
GGCGCGCTGG TTCTCGAACA ACATGCCGAA TTGCGCGCCA TGCTCGAAGC GCGGGCGCCG
GCGGCGGCGG GTCTGTTTGC CGAGCCCCTG ATCAGCCGGG GCAACGACCA GGCGGCGGCG
TCGGTGTCGT GGTACGGCGA TGTGGATGGC CAGCCGGTGC CCCTGTCGCG GCTCGATTCC
GCCTCGCGTG CAGAGGTGCA GGCACGGCTG CAGGCGCAGG TGACGCCGCT CCTGCCGCTG
CTGGATGACC CGGAGGTCGG CGCGATGCTG TCGCGGGCGC TCTACACGCT GGAGCCAGGT
TCGATCGTGG CGGTCGACGG CACCCCGCTG TTGCTGAACT GGGGGATGTT GCCGGACGGG
TTCGAGCGGG ACCGCAGCGC GCGGGCCAAT CATTTCGCGC AGACCCTGGG GGCGTTCGTG
CCGTTCCCGG CGCCGCCGCC CCTCGGCCCG TCCGAAGCGC AGAAGTATCG CGAGGCGATC
GCGGCTCCGC GGGCCGCGGC TGGCGACACA GGTCCCGCGC CCGCGACAGG TGCCGCTGCA
GCCGCCGCCG CGACCGGCGG TATGGCGGCA GCATCGGCTG CCAAGGCCCC ACCACCGCCC
CCGTCCCCGC CGCCTGCCGA GGCGGAACCG CGCCGGGTGG GGCCGGGGGG CTGGGTGCCC
CTGCTGGTGC TGACGGTGCT GGCCGCGGTC GTGCTGCTCT GGCTGTTGCT GCCGGGCACG
CGGCTCTTCC CGAACGACCC GTCGGAACAG GCGATCTCGG ACGTGGCGGC GGCGGAACTG
GCCGAGGAGG TGAACGTCGC CCTGGAGGCG CGGCTGGCCA GCCTCCAGGC GGCGCTGGAC
GGGGCGCAAT GCCGGGCGGA TGGCACGTTG CTGATGCCCG ACGGGATGAC CATCGAGGGC
CTGCTGCCGC CCGACCCCCG TGATCCGAAC GACCGCGCCG GGGCCATCGT GCCCGCCGAT
CTCACCCCGA TCCTGCCGCC CGATCCCGCG CGGGTGGCGG TGCCGACAGC CACCGGCACG
CTGGAGACGG CGAACCTGCT GGCGCTGGTC GATGCGCGCA CGGCGCTGGT GATCGCGCAG
ACGGCGACGG GCACCGGGAC CGGGACGGGG TTCTTCGTGG GGCCGGACCT CCTGGTGACG
AATTTCCACG TGGTTGAGGG GGCTGCCGCC GACAGCATCT TCGTGACCAA TGAGGCGCTG
GGCGCCGTGC GCCAGGCGCA GTTGCTCAAG CAGTCGGGAC CGTTGCAGGC CACGGGGGCG
GATTTCGCCC TGCTGCGCGT GCCCGGGGCG AACCAGCCCG CGTTCGACAT TCTGCAGGGC
ACCGAAAGCC TGCGGCTGCA GGCGGTGATC GCGGCGGGCT ATCCGGGGGA CATCCTGCGC
ACCGACGCGC AGTTTTCCCA GTTGCGCGCG GGGGATCTGA GCGCTGTGCC GCAACTGGCG
GTCACCGACG GGACGGTCAG TGTCGAGCAG GACATGGCGC CGCGCAACAC CCGCGTCGTG
GTCCATTCCG CGCCGATTTC CACCGGCAAC TCGGGCGGGC CGCTTCTGGA CAGTTGCGGA
CGTCTGGTGG GGGTGAACAC CTTCGTGGTG CAGGGCCCCT TGCGGAACCT GAACTTCGCG
CTGGCCAGTC CCGAGCTGCT GGGCTTCCTG CAAGGGACGG GGGCTTTGCC CAATGTGGTT
TCCAGCCCGT GCAGGCCGCA GGTCGCGCGC CCGTCGCCGC CGCCCGCCGT GGCGGCCTTG
CCCGCGCCCG GGGCACCGGC GGAGGGCATC CCGGCCCTGC CGCTGCCCGG CGCGACGCCC
GAGTAG
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| Protein sequence | MADYFLVKTP LTLENCLSHD GALVLEQHAE LRAMLEARAP AAAGLFAEPL ISRGNDQAAA
SVSWYGDVDG QPVPLSRLDS ASRAEVQARL QAQVTPLLPL LDDPEVGAML SRALYTLEPG
SIVAVDGTPL LLNWGMLPDG FERDRSARAN HFAQTLGAFV PFPAPPPLGP SEAQKYREAI
AAPRAAAGDT GPAPATGAAA AAAATGGMAA ASAAKAPPPP PSPPPAEAEP RRVGPGGWVP
LLVLTVLAAV VLLWLLLPGT RLFPNDPSEQ AISDVAAAEL AEEVNVALEA RLASLQAALD
GAQCRADGTL LMPDGMTIEG LLPPDPRDPN DRAGAIVPAD LTPILPPDPA RVAVPTATGT
LETANLLALV DARTALVIAQ TATGTGTGTG FFVGPDLLVT NFHVVEGAAA DSIFVTNEAL
GAVRQAQLLK QSGPLQATGA DFALLRVPGA NQPAFDILQG TESLRLQAVI AAGYPGDILR
TDAQFSQLRA GDLSAVPQLA VTDGTVSVEQ DMAPRNTRVV VHSAPISTGN SGGPLLDSCG
RLVGVNTFVV QGPLRNLNFA LASPELLGFL QGTGALPNVV SSPCRPQVAR PSPPPAVAAL
PAPGAPAEGI PALPLPGATP E
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