| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0894 |
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| Symbol | |
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| ID | 5710584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 910592 |
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| End bp | 911965 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641266804 |
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| Product | peptidoglycan-binding domain 1 protein |
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| Protein accession | YP_001532240 |
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| Protein GI | 159043446 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCA AGCACGCGAT TGCGGTGGCC TGCGCGGTCA CACTCACCTC GACCCCCATG
GCAAAAGCCG ACCTGCACGG CGTGATCGGC GCGATCATCG GTGGTGCGAT CATCAACGAC
ATGGCCAGAC AGCGCCCCAG CCAGCCAACC CGGCCCAGCG TCAGCTCCGC GCAGCGACAG
GAGAATCGCA ACGTGCAAAC CGCGCTCAAT GCGTTCGGCT TCCCGGTCGG GACGGTCGAT
GGCTCCCTCG GGCCGAAATC TCGCGCCGCC ATCGGAAATT ACCAGGCGTA TATGGGCTTC
CAGAGCACCG GGTATCTCGA TGATTACCAG AAGGGCGTGC TGCTGGACGG CTACAGCCGG
ATGCAGGCGG GCGGTGGTTC GGCCTTCCCG AACGTGGTGG CTGCCGAAGG GACCAAGGGC
CTGCTGAAGG CGTTCCAGGA TCCGAGCTAT GCCCAGCGGT TCGGGGCGCC GACCTTCCCC
AACCCGCAAG TGCCGCAAGG ACAGCAGGTC GCGTCCCCGC AGGCACCGTT CGGGGCGCCG
CAGAACTTCG GGGTGCAACC CAACGTGCCC AGCCCCGTGC CGCAGACCAC CCGCGTGGTC
GCCCCGACCC AGACCCCGAC CCCGGCGCCG ACGCAGGTCG CCCCCCTGGC GATCCCGCCG
CTCGCCCCCA TGGGTCAGGT CGCCAAGAGC ATGGCGGAGC GCTGCGAACT CGTGACGCTG
ATGACCCAGA CAAACCAGGG CATGGTGCAG GCCGCGGCGA TGACCGATGC AGACCAGGCG
CTGAGCGAGC AGTTCTGCGA GGCGCGCAGC TTCGCGATTT CCGCCGGACA GAGCTATGCA
GCGCAACTGC GAGTAAGCGA CGAGCAACTG ACCGCGACCT GTTCGCAGAT CTCGGACGCG
ATGGTGCCAG CCCGTGACCT TGTGAACAGC GCCACGGCCG ATGTGGTGCA GGGGCGCGTG
GCGGAGATCA ACGCGCAGAT CGGGCTGGCC GACACGTCCA CCGCCGCGGC CTACGGCCAG
CTCTGCACCG GGATCGGGTA CCGCCAGGAC AATGCGGAGA TGGCCCTTTC CGGCGCGCTG
CTGTCCTTTG CGGTGGGTGC GCTGCCCTAT GCCGAACTGG TCGCGCATCA CAAGCGCGAG
GGCTTCGGGT TGCAGCCGAA CGCGGCAGGC TCGGTGGCGT GGTACGATAC GGCGCTCGGC
GCCCTGGAAC AGGGGGCGAC CCCGGCCTTC CTGCCGTCCA AGTCGCCGGA GCGCGTCGCG
GTGATGCGGG CCGCGATCAA GTCAGGTCAG CTTCAGGCGC AGCCGGGTGG TGGCCTGCCG
CCCCTCGTGC CCGCGGTCGG TGGCGGCATC CCGGCCTTGC CGCTGCCGCA GTGA
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| Protein sequence | MHFKHAIAVA CAVTLTSTPM AKADLHGVIG AIIGGAIIND MARQRPSQPT RPSVSSAQRQ
ENRNVQTALN AFGFPVGTVD GSLGPKSRAA IGNYQAYMGF QSTGYLDDYQ KGVLLDGYSR
MQAGGGSAFP NVVAAEGTKG LLKAFQDPSY AQRFGAPTFP NPQVPQGQQV ASPQAPFGAP
QNFGVQPNVP SPVPQTTRVV APTQTPTPAP TQVAPLAIPP LAPMGQVAKS MAERCELVTL
MTQTNQGMVQ AAAMTDADQA LSEQFCEARS FAISAGQSYA AQLRVSDEQL TATCSQISDA
MVPARDLVNS ATADVVQGRV AEINAQIGLA DTSTAAAYGQ LCTGIGYRQD NAEMALSGAL
LSFAVGALPY AELVAHHKRE GFGLQPNAAG SVAWYDTALG ALEQGATPAF LPSKSPERVA
VMRAAIKSGQ LQAQPGGGLP PLVPAVGGGI PALPLPQ
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