Gene Dshi_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0886 
Symbol 
ID5710576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp901082 
End bp901924 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content68% 
IMG OID641266796 
Producttranscriptional regulator 
Protein accessionYP_001532232 
Protein GI159043438 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.574379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACC AGACCCCTTC TCCGCGCCGA AGCCGCGGGC GCCCCAAGAA TGCCTTTTCC 
GACGGGCAAT CCAGCACGAT CCAGGCCCTG GACCGCGGTT TGTCGGTCCT GAGTGCCCTG
GCCCGGGACG GGGGCGGGAC GCTGTCGGAC GTGTCCATGC GCCTCGGGAT GCCCGCCTCC
ACCGCGCACC GGGTGCTCGC GACCCTGGAA AAGCACGGCT ATGTCGACAT GGACGAGGCG
AGCCAGACCT GGCGCGTGGG GTTGGAGGCG TTCCGGGTCG GCACCAGTTT CATGCAGCGG
ACCAACCTTC TGGAAGTGGG CCGCGCCTCC ATGCGCACCT TGATGGAGCA GACCGGCGAG
ACCGCCAATC TCGGCATTCT CGACAATGAC CACGTGGTCT TCATCGGCCA GGTGGAGACC
CACAACCCGA TCCGGGCCTT CCACCGGCCG GGCTCCAGCG GGCCGATGCA TGCGTCTGGA
ATCGGCAAGG CGCTGCTGGC GGCGATGCCG CAGGGTGCGG TGGAAAACCT GTTTCGGCGC
ACTGGGTTGC AGCAATTCTC GCCCAAGACC CTGACCGACC CGGAGGCGTT GCTGAGCGAC
CTGCGGATCA CCCGCAAGCG GGGCTGGTCC TTCGATAACG AGGAACGCTA CGAGGGCATG
TGCTGCGTGG CGGCGGTGAT CTATGACAGC TTCCGGGAGC CGATCGCCGG GATCTCGGTT
TCCGGCCCTT CGGCGCGCTT CGCCCCCGGG GCCCTGCCCG CCCTCGGGGC GGCGGTGCAG
ACCGCCGCGC GGGACGTCAC CGCCCAGATC GGCGGGGAGA TGCCGCAGAT CGCCGCCGAA
TAG
 
Protein sequence
MKDQTPSPRR SRGRPKNAFS DGQSSTIQAL DRGLSVLSAL ARDGGGTLSD VSMRLGMPAS 
TAHRVLATLE KHGYVDMDEA SQTWRVGLEA FRVGTSFMQR TNLLEVGRAS MRTLMEQTGE
TANLGILDND HVVFIGQVET HNPIRAFHRP GSSGPMHASG IGKALLAAMP QGAVENLFRR
TGLQQFSPKT LTDPEALLSD LRITRKRGWS FDNEERYEGM CCVAAVIYDS FREPIAGISV
SGPSARFAPG ALPALGAAVQ TAARDVTAQI GGEMPQIAAE