| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0885 |
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| Symbol | |
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| ID | 5710575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 900110 |
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| End bp | 901078 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266795 |
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| Product | oligopeptide/dipeptide ABC transporter |
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| Protein accession | YP_001532231 |
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| Protein GI | 159043437 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCC TGGTTTCCGT CAAGGGCCTG AGCCGCCGCT TCGACGTCTC CAAACCCTGG
CTCAACCGGG TGCTCGAACG GCTGCCCAAG GCGATCCTGA CCGCCGTGTC GGATGTCAGT
TTCGATGTCG AGGAACGCAC CGTCTACGCC CTGGTGGGCG AGAGCGGATC GGGCAAGTCC
ACCATCGGCA AGATGGTGGT CGGGTTGCTG CAACCCTCTG AAGGATCAGT GAAAATCGGC
GGCACCGATC TCGCGCGAGA GACCGACCCG GCCAAGCTCG ACCTGGTGCG CGCGGACATC
CAGATGATCT TCCAGGACCC GTTCGCCAGC CTCAATCCCC GCTGGCGCGT CCGCGACATC
ATCAACGAAC CGGTCTCGGC CCGGGGCGGC GATGTGAAGG GGCTTGCGGA ACGCCTGCTC
GAACAGGTCG GTCTGGCCGC CGAAGACGCC GGCAAGTTCC CCCACGAATT CTCCGGCGGC
CAACGCCAAC GCATCTGCAT CGCGCGGGCG CTGGCGTCGG AGCCGAAGCT GATTGTCTGT
GATGAGCCGA CCTCGGCGCT GGACGTCTCG GTGCAGGCGC AGGTGCTGAA CCTGATGTCC
GATCTCAAGG ATGAATTCGG GCTGACTTAT CTCTTTATTT CCCATGACTT GACCGTGGTG
CAGCATGTGG CCGACCGGAT CGGGGTGCTC TATCTCGGCC GGCTGGTGGA AGAGGCGGAT
CCCGACACCC TGTTCGAAAA TCCGCGCCAT CCCTACACGC AGATGCTGTT GGCGGCGGCG
CCGAAAATGG ACGGGTTCGG GCGCGAGGTG GAGCCGCCCA AGGGCGAGAT CCCGGACCCG
ATCAACCCGC CCACGGGCTG CGCCTTCCAC CCCCGCTGCC CGATTGCCGT GGCCCGCTGC
AGCGCCGAGC GGCCGGAGTT GCGTCCCCTG GGCGGCGCGC GGGTCGCCTG TCACCTGGCC
GAGGCGTAG
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| Protein sequence | MSILVSVKGL SRRFDVSKPW LNRVLERLPK AILTAVSDVS FDVEERTVYA LVGESGSGKS
TIGKMVVGLL QPSEGSVKIG GTDLARETDP AKLDLVRADI QMIFQDPFAS LNPRWRVRDI
INEPVSARGG DVKGLAERLL EQVGLAAEDA GKFPHEFSGG QRQRICIARA LASEPKLIVC
DEPTSALDVS VQAQVLNLMS DLKDEFGLTY LFISHDLTVV QHVADRIGVL YLGRLVEEAD
PDTLFENPRH PYTQMLLAAA PKMDGFGREV EPPKGEIPDP INPPTGCAFH PRCPIAVARC
SAERPELRPL GGARVACHLA EA
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