| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0884 |
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| Symbol | |
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| ID | 5710574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 899031 |
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| End bp | 900113 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266794 |
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| Product | oligopeptide/dipeptide ABC transporter |
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| Protein accession | YP_001532230 |
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| Protein GI | 159043436 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.892732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC CCGTCCTGTC GATCCGCAAC CTGACCGTGG ACATCCCCAC GCGCTACGCG
GTGCTGCGGC CCGTGGACAA GGTGTCCTAC GACATCGCGC CCGGCGAGAT CCTGGGCGTG
GTGGGCGAGA GCGGCGCGGG CAAGTCCATG GCCGGGAACG CGGTGATCGG GCTGCTGACC
CCGCCGGCCC ATATCTCCTC CGGCGAGGTC TGGCTCAACG GCAAGCGGAT CGACAGGCTC
ACCCCCGAGC AGATGCGCCG GGTGCGCGGC AAGGATATCG GCATGGTCTT CCAGGACCCG
CTGACCTCGC TCAATCCGCT CCTGCGGATC GGCGACCAGC TGACCGAGAC CATGCTCGCG
CATCTTCCGA TCTCCCGGGC GGAGGCCGAG GAGAGGGCGG TCGCCGCCCT CGAGGAGGTC
GGCATCCCAG CCGCGCGACA GCGGGTGAAC AGCTACCCGC ACGAGTTTTC CGGCGGGATG
CGCCAGCGGG TGGTGATCGC GCTCGCGCTC TGTGCCGAGC CGTCCCTCGT GATCGCGGAC
GAGCCGACCA CCGCCCTCGA CGTCTCGGTG CAGGCCCAGA TCATCGCGCT GCTGAAACGG
CTCTGCCGCG AACGCGGGAC CGCCGTGATG CTCATCACCC ACGACATGGG CGTGATCGCC
GAGGCCGCCG ACCGCGTCGC GGTGATGTAT GCGGGCCGCC TGGCCGAGCT TGGCCCGGTG
CGCGAGGTGC TCACCGCCCC GCGCCATCCC TACACCTTCG GGCTGATGGG CTCCACGCCG
CTGGCATCGA AGGGGCTCAA GCGGCTGCAT CAGATCCCCG GCTCCATGCC ACGCCTCGGG
CGGCTGCCCC CGGGCTGCGC CTTCAGCCCG CGCTGCCCCC GGGCGCAGGA CAAGTGCCGC
CATGACCCGG GTCCGGTGAT CGACGCCGAC GGGGCCGCGG CCTGCTGGTT CCCGATGGAC
GGGACCGAGG GCATCGGCGG TGACGCAACA CCACCGCACG GTGGTGCCCG ACACTTGCCC
GACACAAGTC CGACAGGGGC CCGACCCGGG GCCGACGCCG GTTTTACGGG GGGCGGGGCA
TGA
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| Protein sequence | MTQPVLSIRN LTVDIPTRYA VLRPVDKVSY DIAPGEILGV VGESGAGKSM AGNAVIGLLT
PPAHISSGEV WLNGKRIDRL TPEQMRRVRG KDIGMVFQDP LTSLNPLLRI GDQLTETMLA
HLPISRAEAE ERAVAALEEV GIPAARQRVN SYPHEFSGGM RQRVVIALAL CAEPSLVIAD
EPTTALDVSV QAQIIALLKR LCRERGTAVM LITHDMGVIA EAADRVAVMY AGRLAELGPV
REVLTAPRHP YTFGLMGSTP LASKGLKRLH QIPGSMPRLG RLPPGCAFSP RCPRAQDKCR
HDPGPVIDAD GAAACWFPMD GTEGIGGDAT PPHGGARHLP DTSPTGARPG ADAGFTGGGA
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