| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0865 |
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| Symbol | |
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| ID | 5710555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 879739 |
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| End bp | 881922 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266775 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_001532211 |
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| Protein GI | 159043417 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0607786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.455618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATT ACCTCGACAC CGCCCTCGCC GCGCCCAGGC CGTCGCGCCG CGCCTTCCTG
AAACTCTCTG CCGGCGCGGT CGGCGGGCTG CTGCTTGGCG GTGCGCTGCC GCGTGCGGCC
CAGGCCATGG GCGATGACGC CCTTGCGCAG CCTTTCGTGC ATATCACGCC CGACAATGTG
GTCACCGTGC TGGTCAAGCA TCAGGACATG GGGCAGGGGG CCGCGACTGG CCTCGCCACC
CTCGTGGCCG AGGAGCTGGA CGCCAGCCCG GACCAGATCG CGGTGGAATT CGCGCCCTCC
AACCCGCAGG TCTATGCCAA CTCCCTGTTC GGGGTGCAGG GCACCGGCGG GTCCACCGCC
ATGCGCAATT CCTTCACCCA GTACCGCGAG GCCGGGGCCT CGGCCCGCGC CATGCTTGTG
GCCGCGGCGG CGCAAGCCTG GGGCGTCGCC CCAGAGGCCG TGACCGTTGC GGACGGCACG
CTGTCGAGTG GCGCGAACTC CGCCAGCTTC GGCGACATGG CCAGTGCCGC CGCCGCGCAG
CCGGTGCCGG AGGCGGTGAC GCTAAAGCGC GCCGACCAGT GGCGCCTGAT CGGCAAGGAC
ATGGCCCGGG TGGAAATCCC CGCCAAGACG CGCGGCTCGG TGGGCCTCTT TGGGATGGAT
GCCAAGCCCG AGGGCGCGCT GATCGCCGTG ACCGCCCGGC CGCCGCGCTT CGGCGCCACC
GTGGCTTCGG TCGATGCCGA GGCGGCGCGG GCCATGCCGG GCGTGCAGGC GGTGCTGACC
ATCCCGCAAG GGGTGGTGGT GGTGGCCGAC AACACCTGGC GCGCCATGCA GGCCCGCGAC
GCGCTGGAGA TCGAATGGGA TATGTCGGGG GCCGAAACCC GAGGCACCGA AGAGATCACC
GCCGAGTTCG AGGCGCTGCT GGACCAGCCC GGTCTCCCGG CCGTCGCCCG CGGCGATGCG
GCGGGCAAGC TCGCGGGCGC CGCGCAGGTG GTCGAGGCGC GCTATCACTT CCCCTATCTC
GCCCACGCGC CGATGGAGCC GCTCAACATG ACCGTGCTCT TCGATGGTGA ACGGGCGACG
CTTTGGGGTG GCAGCCAGAT CCAGACCATC GACCACAACG TCGCCGCCGG GGTGCTCGGC
ATCCCCTTCG AAAACGTGGC GATCAACACC ATGTGGGGGG GCGGCTCCTT CGGGCGGCGC
GCCACCGCGG ACGGCCACCT GGTGGCCGAG GCCGCGACGA TTGCGGCCGC CTGGCTGGGC
GAGACCGGCA GGCCCGCGCC GATCAAGCTG GTCTATACTC GCGAGGACGA CATCAAGGGC
GGCTATTACC GGCCTCTGAC GCTTCACAAG GTCCGCGCCG GGGTGGATGC CGAGGGCAAT
ATCGCGGGGT GGGCTCATCG CGTGGTCGGC CAGGGCATCA TGATCGGCAC CCCCTTCGAG
GAGTTCCTCG TCAAGGACGG GGTGGATCAT TCCTCGGTCG AGGGGGCGGC GGATACCACC
TACAGCCTGC CGGACATGGC GATGGACGTG CATCACCCGT CCGCCGGGGT GCCGGTGCTG
TGGTGGCGGG CCGTGGGCCA TACCCACACC GCCTATGTGA TGGAGACGAT GATGGACGCA
CTGGCCGAGG CCGCGGGCCG CGATCCGGTG GAATTCCGGC TCGCCCATCT CGGGGACGAC
CCGCGCCTGG CGGGTGTGCT GCGGCTGGCC GCCGAGAAGG GGGGCTGGGA CAGCCCCGCG
CCCGAAGGCA TCCACCGCGG CGTCGCGGTC CACAAGAGCT TCGAGAGCTA CGTGGCCGAG
GTGGCTGAGG TGCGGATCCG CGAGGACGGC ACCGTGAAAG TCGAGAAGGT GACCTGTGCG
GTGGATTGCG GCGTAGCGAT CAACCCCGAC AACATCGTGG CGCAGATCGA GGGCGGGCTG
GCCTACGGCC TCTCGGGGAT CCTGCGCGAG GAGATCACCA TGACCGACGG GGCGGTGGAC
CAGTCCAACT ACCCCGATTA CGCGGCGCTG CGGATCGCCG ACATGCCCCG GGTCGAGGTC
CATATCGTGC CTTCCACCGA AGGGCCCAGC GGTGTGGGCG AGCCGGGCAC GCCGCCCATC
GGCCCCGCCG TGGCCAACGC GGTCGCCCGC GCCACGGGCC AGCGGATCAC GGTCCTGCCG
TTTTCCAAAC ACGGGCTTGC CTGA
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| Protein sequence | MLHYLDTALA APRPSRRAFL KLSAGAVGGL LLGGALPRAA QAMGDDALAQ PFVHITPDNV
VTVLVKHQDM GQGAATGLAT LVAEELDASP DQIAVEFAPS NPQVYANSLF GVQGTGGSTA
MRNSFTQYRE AGASARAMLV AAAAQAWGVA PEAVTVADGT LSSGANSASF GDMASAAAAQ
PVPEAVTLKR ADQWRLIGKD MARVEIPAKT RGSVGLFGMD AKPEGALIAV TARPPRFGAT
VASVDAEAAR AMPGVQAVLT IPQGVVVVAD NTWRAMQARD ALEIEWDMSG AETRGTEEIT
AEFEALLDQP GLPAVARGDA AGKLAGAAQV VEARYHFPYL AHAPMEPLNM TVLFDGERAT
LWGGSQIQTI DHNVAAGVLG IPFENVAINT MWGGGSFGRR ATADGHLVAE AATIAAAWLG
ETGRPAPIKL VYTREDDIKG GYYRPLTLHK VRAGVDAEGN IAGWAHRVVG QGIMIGTPFE
EFLVKDGVDH SSVEGAADTT YSLPDMAMDV HHPSAGVPVL WWRAVGHTHT AYVMETMMDA
LAEAAGRDPV EFRLAHLGDD PRLAGVLRLA AEKGGWDSPA PEGIHRGVAV HKSFESYVAE
VAEVRIREDG TVKVEKVTCA VDCGVAINPD NIVAQIEGGL AYGLSGILRE EITMTDGAVD
QSNYPDYAAL RIADMPRVEV HIVPSTEGPS GVGEPGTPPI GPAVANAVAR ATGQRITVLP
FSKHGLA
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