| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0855 |
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| Symbol | |
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| ID | 5710545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 867282 |
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| End bp | 868169 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266765 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_001532201 |
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| Protein GI | 159043407 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.21199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.166966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTATG ACATCCGGCT GAAGCTCGAT CACACCTATG CGGGCCGGGC GGGCGGCGCG
CGGCACCTGA ACCGGGTGAT GCCCGCGGCC CTGCCCGGAC GACAGATCGT GCAGACCAGC
CTGCTGACCT GCGACCCCGT GGCGGACACG CGGAACGCTT TCGTGGATTT CTTCGGCAAC
CGGGCGACGG TGTTCTACCA CGACGCGCCC CATGACAAGA TGCGGATCAC CATGCAGGCG
CGTGTGCGCT GCCTGACGCG CGAGCCGCAG CTCGACATCT CCCCCGACCG GAACCGGCTC
GCACAGGAAA TCGCCGAGGT TCGCCATCTC GACGGGCAGG CCCCGCATCA CTTCCTCGGC
CCCTCGCCGC GGGTGCCGGC CCGGTCCGAG ATCGCGGCCT TTGCGGCCGA CATCACCGCG
CCGGTCACGG GGGGGGTGCT GGCGCAGATG CAGGCGCTGG GCCACGCGCT CCATGCCGAG
ATGACTTTCG ATGCGACAGC GACCACGGTG GACACGCCGA TGATCGACGC CTTCGTCAAC
CGCCACGGCG TCTGCCAGGA TTACAGTCAT ATCTTCATCG CGGCCCTGCG CAGCCTGGCG
ATCCCCGCAC GCTATGTCAG CGGCTTCCTG CGGACCCTGC CCCCGCCGGG TCAGCCCCGG
CTGGAAGGCG CGGACGCGAT GCATGCCTGG GTCAGCGCCT GGTGCGGCTC GGAACTGGGC
TGGGTCGAGT ACGACCCGAC AAACGATATC ACCGTGCAGA CGGATCATAT CGTGGTGGCC
TATGGCCGCG ATTATTCGGA TGTCTCGCCG ATCAAGGGGG TCTTGCGCAC CGCCGCCAAG
GGCACGAGTG CCCAATCGGT GGATGTGGCA CCGGTCGGCG CGGTCTGA
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| Protein sequence | MLYDIRLKLD HTYAGRAGGA RHLNRVMPAA LPGRQIVQTS LLTCDPVADT RNAFVDFFGN
RATVFYHDAP HDKMRITMQA RVRCLTREPQ LDISPDRNRL AQEIAEVRHL DGQAPHHFLG
PSPRVPARSE IAAFAADITA PVTGGVLAQM QALGHALHAE MTFDATATTV DTPMIDAFVN
RHGVCQDYSH IFIAALRSLA IPARYVSGFL RTLPPPGQPR LEGADAMHAW VSAWCGSELG
WVEYDPTNDI TVQTDHIVVA YGRDYSDVSP IKGVLRTAAK GTSAQSVDVA PVGAV
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