| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0853 |
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| Symbol | fadD2 |
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| ID | 5710543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 865066 |
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| End bp | 866964 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266763 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_001532199 |
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| Protein GI | 159043405 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.198925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0889717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATCA CCATCGCGAC GCTGGCGGAC AAGGCAGAGG TCGAGGCCGC GCATCCGTGG
GAGGCCGCAC AGCCGGCGCA GACGCTCTAC GAGCTGCTGA CACGGACCAG GAACGCCCAT
GGGGATCGGC GGGCGATGAC CTTCACGCTG ACCTCTGATC CGAAGGACGC GGGCGAGACG
CTGACCTGGC GCGAGCTGCA CGGCAAGGCG ACCCAGGCGG CGAACTTGTT CCGCTCCCTC
GGGATCGGCG AGAATGACGT GGTCGCCTAC GTGCTGCCCA ACGCCTCGGA GACGGTCTGG
ACCTATCTCG GCGGGTCGGT GGCCGGGATC GTGAACCCGA TCAACCCGCT GCTGGAGCCG
GACCAGATCG CATCGATCCT GAACGAGACC GGGGCCAAGG TCGTGGTCAC GCTCAAGTCC
TTCCTGAAGA CCGACGTGGC CCAGAAAACC GCCGAAGCCG TGGCCATGGC GCCGGGGGTG
ACCCATGTGC TCGAGGTAGA TCTCAAACGC TATCTCAGCC CGCCCAAGAG CTGGATCGCG
GGTCTGCTGC GGCCGAAGAA CCCGGTCAGG CATCACGCCA AGGTGCTGGA TTTCAACGCC
GAGCTGGCGC GGCAGAAATC CGACGGCCTG ACCTTCCCCG ACAGTTTCGA GGACCGCGTG
GCCGCCTATT TCCACACCGG TGGCACCACG GGCATGCCCA AGGTCGCGCA GCACAAGTAT
TCCGGCATGA TCTACAACGG CTGGCTCGGG GCGGAGTTGC TGTTTACCCA CGAGGACACG
CTGATCTGTC CGCTGCCGTT GTTTCATGTG TTTGCCTGCT ACCCGGTGCT GATGTCGGTC
ATCACCTCCG GCGGGCATGT CGTCTTTCCG ACGCCGCAGG GCTACCGCGG CGAGGGCGTA
TTCGACAACT TCTGGAAGCT GATCGAGCGG TGGGAGGTGA CCTTCATGAT CACCGTGCCC
ACGGCGCTGG CGGCACTGAT GCAGCGCCCG GTGGATGGGG ATGTCTCGAC CCTGCGGATC
GGGATTTCCG GCTCCGCGCC CTTGCCGATG GAGCTTTACA GCCGTTTCAA GGAGGCGACG
GGCGTCAGCA TCGCCGAGGG CTACGGTCTG ACCGAGGCCA CGTGCCTGGT GTCCTGCAAC
CCGATCGACG GGGTGCAGAA GGTGGGCTCC GTCGGGATCC CGCTGCCCCA TACGGAGGTA
CGCATCCTGC ATTGCGAGGA TGACGGCACG ATCAGCCATG AATGCGCGAC CGACGAGATC
GGCGAGATCT GCATCGCCAA TCCCGGGGTG TACGAGGGTT CGACCTATAC CGAGGTCGGC
AAGAACCTGG GGCTCTATGC GGACCAGATT TACCTTCGGA CCGGGGATTT GGGCCGGATC
GACGAAGAAG GCTACCTGTG GATCACCGGC CGGGCCAAGG ATCTCATCAT CCGCTCGGGC
CACAATATCG ACCCCGCCGA GATCGAGGAG GCGCTGATGG CCCATCCCGC GGTCGCCATG
GTCGGTGCGA TCGGACAGCC GGATGCCTAT GCCGGCGAGT TGCCCGCGGC CTATGTCGAA
CTGGTGGCCG GCGCGCAGAC CACTGTCGAG GAGTTGATGG CATTCGCCAA GGAGCATGTG
CACGAACGCG CGGCCCATCC CAAGCACCTG GAATTTCTCG ACGAGTTGCC CAAGACCGCC
GTGGGCAAGG TGTTCAAGCC CGATCTGCGT AAGCTCGCGA TCAAGCGGGT CTATGACCGG
GCGCTGGCAG AGGCGGAGCA AGCCGCCGAG GTGGCCGACG TGGTCGAGGA CAAGAAGCGC
GGGCTGGTGG CACGCCTGCG CAAGACCGGG GACGTGGACG GCGACGCGGT GGCGCGCATC
TTGGGCAGCT ACACCCGGCC CTGGGAGTGG ATCGACTGA
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| Protein sequence | MGITIATLAD KAEVEAAHPW EAAQPAQTLY ELLTRTRNAH GDRRAMTFTL TSDPKDAGET
LTWRELHGKA TQAANLFRSL GIGENDVVAY VLPNASETVW TYLGGSVAGI VNPINPLLEP
DQIASILNET GAKVVVTLKS FLKTDVAQKT AEAVAMAPGV THVLEVDLKR YLSPPKSWIA
GLLRPKNPVR HHAKVLDFNA ELARQKSDGL TFPDSFEDRV AAYFHTGGTT GMPKVAQHKY
SGMIYNGWLG AELLFTHEDT LICPLPLFHV FACYPVLMSV ITSGGHVVFP TPQGYRGEGV
FDNFWKLIER WEVTFMITVP TALAALMQRP VDGDVSTLRI GISGSAPLPM ELYSRFKEAT
GVSIAEGYGL TEATCLVSCN PIDGVQKVGS VGIPLPHTEV RILHCEDDGT ISHECATDEI
GEICIANPGV YEGSTYTEVG KNLGLYADQI YLRTGDLGRI DEEGYLWITG RAKDLIIRSG
HNIDPAEIEE ALMAHPAVAM VGAIGQPDAY AGELPAAYVE LVAGAQTTVE ELMAFAKEHV
HERAAHPKHL EFLDELPKTA VGKVFKPDLR KLAIKRVYDR ALAEAEQAAE VADVVEDKKR
GLVARLRKTG DVDGDAVARI LGSYTRPWEW ID
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