Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0851 |
Symbol | |
ID | 5710540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 862042 |
End bp | 862707 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641266760 |
Product | protein of unknown function DUF159 |
Protein accession | YP_001532197 |
Protein GI | 159043403 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00651427 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.246274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGAC GTTTTTCCCT GACCCTGCCG ACCGAGGCCA TGGCGCAGCT TTTCGAGGCA GCGCCATCCA ATGCCCTGCC AGACGGCCCT CGCTACAACA TCTGTCCCAC CAATGACGTG GCGGTGGTGA CCTCGGATGC GGGCACGCGA CATCTGCGCC CGATGCGCTG GGGGTTTCTG CCGCAGTGGT ACAAGAGCCC GACCGACGGG CCGCTCCTGA TCAACGCGCG GGCCGAGACC ATCGCCGAGA AACCGGCCTT CCGCGCCGCC TGCCGCGCGC GGCGCGGTCT GATCCCGGCC ACGGGGTTCT ATGAATGGAC CAAGACCGCG GAGGGCGCGC GCCTGCCATG GTACATTCAC CCCAGGGACA ACGCGCCCCT TGCCTTCGCG GCCATCTGGC AGGACTGGGA AGGCGCCGCG GCCCGGTTCA CCACCTGTGC AATCGTGACC ACCGCCGCCA ATGCACCGAT GTCGGCGCTG CACCACCGGA TGCCGGTGAT CCTCGGGTAC GGGGACTGGC CGCTCTGGCT GGGGGAGGCA GGCAAGGGGG CGGCAAGGCT GATGCGGCCC GCACCCGAAG ACCTTCTGGC CTTTCACCGG GTCGATGTGG CGGTGAATTC CAACCGGGCT GCCGGGCCGG ACCTGATCGC GCCGCTTCCA GCCTGA
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Protein sequence | MCGRFSLTLP TEAMAQLFEA APSNALPDGP RYNICPTNDV AVVTSDAGTR HLRPMRWGFL PQWYKSPTDG PLLINARAET IAEKPAFRAA CRARRGLIPA TGFYEWTKTA EGARLPWYIH PRDNAPLAFA AIWQDWEGAA ARFTTCAIVT TAANAPMSAL HHRMPVILGY GDWPLWLGEA GKGAARLMRP APEDLLAFHR VDVAVNSNRA AGPDLIAPLP A
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