Gene Dshi_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0851 
Symbol 
ID5710540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp862042 
End bp862707 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID641266760 
Productprotein of unknown function DUF159 
Protein accessionYP_001532197 
Protein GI159043403 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00651427 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.246274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAC GTTTTTCCCT GACCCTGCCG ACCGAGGCCA TGGCGCAGCT TTTCGAGGCA 
GCGCCATCCA ATGCCCTGCC AGACGGCCCT CGCTACAACA TCTGTCCCAC CAATGACGTG
GCGGTGGTGA CCTCGGATGC GGGCACGCGA CATCTGCGCC CGATGCGCTG GGGGTTTCTG
CCGCAGTGGT ACAAGAGCCC GACCGACGGG CCGCTCCTGA TCAACGCGCG GGCCGAGACC
ATCGCCGAGA AACCGGCCTT CCGCGCCGCC TGCCGCGCGC GGCGCGGTCT GATCCCGGCC
ACGGGGTTCT ATGAATGGAC CAAGACCGCG GAGGGCGCGC GCCTGCCATG GTACATTCAC
CCCAGGGACA ACGCGCCCCT TGCCTTCGCG GCCATCTGGC AGGACTGGGA AGGCGCCGCG
GCCCGGTTCA CCACCTGTGC AATCGTGACC ACCGCCGCCA ATGCACCGAT GTCGGCGCTG
CACCACCGGA TGCCGGTGAT CCTCGGGTAC GGGGACTGGC CGCTCTGGCT GGGGGAGGCA
GGCAAGGGGG CGGCAAGGCT GATGCGGCCC GCACCCGAAG ACCTTCTGGC CTTTCACCGG
GTCGATGTGG CGGTGAATTC CAACCGGGCT GCCGGGCCGG ACCTGATCGC GCCGCTTCCA
GCCTGA
 
Protein sequence
MCGRFSLTLP TEAMAQLFEA APSNALPDGP RYNICPTNDV AVVTSDAGTR HLRPMRWGFL 
PQWYKSPTDG PLLINARAET IAEKPAFRAA CRARRGLIPA TGFYEWTKTA EGARLPWYIH
PRDNAPLAFA AIWQDWEGAA ARFTTCAIVT TAANAPMSAL HHRMPVILGY GDWPLWLGEA
GKGAARLMRP APEDLLAFHR VDVAVNSNRA AGPDLIAPLP A