Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0844 |
Symbol | |
ID | 5711470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 854276 |
End bp | 854797 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641266753 |
Product | thioesterase superfamily protein |
Protein accession | YP_001532190 |
Protein GI | 159043396 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.689934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCC CCCGGCCCGA GCCGGTCCAG GTGGTCAAGC AGCGCCGGGA TGCGGCGCTG AACGCGCTGG TGGCCGGTGT GCCCTACATG CGGTTCCTCG GCGTCACGGT GGAGCGGCGC GGGGACGAGT TGACGGCGAT CCTGCCCTTT GCCGAGCGGC TGATCGGCAA CCCGACGCTG CCCGCGATCC ACGGCGGCGT AACCGCGGCC TTCATGGAGG TCACGGCCCA GATCGAGGTC AGTTGGGCGA TGCTGTGGGA CGATCTGGAG GGCGGTCGGA TCGACCCTGA GACCCTCGGG CCCGATACCC TGCCGCGCCT GCCAAAGACC ATTGATTTCA CAGTGGATTA CCTGCGCTCC GGCTTGCCGC GGGACGCCTA TGCGCGGGCG CGGGTCACCC GGGCCGGGCG GCGGTATTCC ACGGTGCAGG TGGAGGCCTG GCAGGACAAC CGCGCGCGGC CCTTCGCCCA GGCCACGGCC CATTTCCTGA TGCCCCGGCG CGATGGGGCG GCGGGTGGCT GA
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Protein sequence | MARPRPEPVQ VVKQRRDAAL NALVAGVPYM RFLGVTVERR GDELTAILPF AERLIGNPTL PAIHGGVTAA FMEVTAQIEV SWAMLWDDLE GGRIDPETLG PDTLPRLPKT IDFTVDYLRS GLPRDAYARA RVTRAGRRYS TVQVEAWQDN RARPFAQATA HFLMPRRDGA AGG
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