Gene Dshi_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0842 
Symbol 
ID5711468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp853357 
End bp853728 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content65% 
IMG OID641266751 
Producttranscriptional regulator 
Protein accessionYP_001532188 
Protein GI159043394 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.399496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGG ATACCCTGAC CTTCAAGGAG ATGTGCGCGG CCTTCGACGT GACGCCACGC 
ACCCTGCGCT ATTACGAGTA TATCGAACTG CTCGCCCCGA TCCGTGACGG GCGCAGCCGG
TTCTACACCC CCCGCGAAGT GGCCCGCATG AAACTCATTC TGCGCGGGCG CCGTTTCGGC
TTCAGCCTCG AAGAAATCCG CCAGTGGCTG CTGATCTACG AAAGGGAGGG GACCGACGCG
CAGAACCGCG TCTGGGTCGA AGAGGCCGGG CGCAAGCTCG AAGAACTCGA AGCCCAGCGG
GACGAGCTGG ACCGCACGAT CGCGGACCTG CGCGCCCTGC GCGAGAGCGT CACCCCACCG
GAGCCACACT GA
 
Protein sequence
MAEDTLTFKE MCAAFDVTPR TLRYYEYIEL LAPIRDGRSR FYTPREVARM KLILRGRRFG 
FSLEEIRQWL LIYEREGTDA QNRVWVEEAG RKLEELEAQR DELDRTIADL RALRESVTPP
EPH