| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0835 |
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| Symbol | fadJ |
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| ID | 5711461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 844051 |
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| End bp | 846264 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266744 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001532181 |
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| Protein GI | 159043387 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TGACCGATTT CACCATGAAA ACGGACGCCG ACGGCGTCGC CATCATCACT
TGGGACGTCC AGGGCAAATC CATGAACGTC ATGAACCAGC AAGGGTTCGA GGATCTCGAC
GCGCTGGTCG ACAAGGCGCT GGCCGATGAC ACCGTCAAGG GGATCATCAT CACCTCCGGC
AAGGACAGCT TTGCGGGCGG CATGGACCTC AACGTCATCG CCAAGATGCG CGACGACGCC
GGCGACGACC CGGCCCGTGG CCTCTTCGAG GGCGTGATGG CCATGCACGG CATCCTGCGC
AAGATCGAGC GCGCCGGGAT GGACCCCAAG ACCAACAAGG GCGGCAAACC CGTCGCCGCC
GCCCTGCCCG GCACCGCGCT CGGCATCGGG CTGGAGATCC CGCTCGCCTG TCACCGGATT
TTCGCCGCCG ACAACCCCAA GGCCAAGATC GGCCTGCCCG AAATCATGGT CGGCATCTTC
CCCGGCGCGG GCGGCACCAT GCGGGTGTCG CGCAAGCTGG GCGCGATGCA GGCTGCGCCC
ATCCTGCTCG AAGGCAAGCT TTTCGAGCCG AAAAAGGCCA AGATGGCCGG CATCGTGGAC
GAAGTGGTGC CCGCGGAGGA GCTGCTCGAC GCCGCCAAGG CCTGGGTGCT CTCCGCCAAG
GATACTGATA TCGTCAAGCC CTGGGACCTC AAGGGCTACA AGTTCCCCGG CGGCGCGCCC
TACCACCCGG CGGGCTTCAT GACCTTCGTC GGCGCCAGCG CCATGATCCA TTCCAAGACC
ATGGGCGTCT ACCCGGCGGC CAAGGCGCTG CTGAGTGCGG TCTACGAAGG GGCCATGGTT
CCCTTCGACA CCGCGCTCAA GATCGAGGCG CGCTGGTTCA CCAACGTCCT GATGAACCCG
TCGTCCAGCG CCATGATCCG CTCGCTCTTC ATCAACAAGG AGGCGCTGGA AAAAGGCGCC
GTCCGTCCCG ACGTGCCCGA CCAGAAGGTG AAGAAGGTCG GCATCCTCGG CGCGGGGATG
ATGGGCGCGG GCATCGCCTA TGTCTCGGCC AATGCCGGGA TTGAAGTGGT GCTGATCGAC
GCCGCCCAAG AGTCCGCGGA TCGCGGGAAG GCCCATGCCG CGGGCATCCT CGACAAGGGC
ATCGCGCGCA AGAAGGTCAC GCCCGAGAAG AAGGACGAGG TGCTCGCCCG CATCACCGCC
ACCACGGACT ATGCCGCCCT CGAAGGGTGC GACCTGGTGG TCGAGGCGGT GTTCGAAGAT
CCGGGCGTCA AGGCCGAGGT GACCGCAAAG GCCGAAGCCG TGATCCCCGG CGATGCGATC
TTCGCGACCA ACACCTCCAC CCTGCCGATC TCGGAGCTGG CCAAGGCCAG CGCCCGGCCT
GAGCAGTTCA TCGGCATCCA TTTCTTTTCG CCCGTGGACA AGATGCTGCT GGTGGAGATC
ATCAAGGGGA GACAGACCGG CGATGTGGCC GTGGCCAAGG CGCTCGATTT CGTGCGCCAG
ATCCGCAAGA CGCCCATCGT GGTCAACGAC GCGCGGTTCT TCTACGCCAA CCGCTGCATC
ATTCCCTACA TCAACGAAGG CATCCGCATG GTGGCCGAGG GCGTCACCCC GGCGCTGGTC
GAAAACGCTG CGAAACTGGT GGGCATGCCG CTGGGGCCGC TGCAACTGGT GGACGAAACC
TCCATCGACC TGGGCGTCAA GATCGCCAAG GCCACGAAAG CGGCCATGGG CGACGCCTAC
CCGGACGGCG CCGTGGACGA GGTGCTGTTC TGGATGGCGG ACGAAGGCCG CCTGGGCCGC
AAGTCCAATG CGGGCTTCTA CACCTATGAC GAGGCGGGCA AGCGTGGTCT GCTCTGGGAA
GGGCTGGCCG ACCGCTACCC GGCGGCCAAG GAACAGCCCG AGCTGACCGC CGTGCAGCAC
CGCCTGCTCA TGGCCCAGGT GCTGGAGGCC GTGCGCGCCC TGGAGGACGG CGTGCTCATG
GACATCCGCG AGGGCGACGT GGGCGCCATC CTCGGCTGGG GCTTCGCGCC GTGGTCCGGT
GGCCCGCTCA GCTGGCTCGA CATGATCGGC GCCGCCCGCG CGGTGGAGAT CTGCGATGCG
CTGACCGACA CCCACGGCGC CCGCTTCACC ACGCCCGCGC TCCTGCGCGA AATGGCCGAG
AAGGGCGAGA CCTTCTATGG CCGCTTCGGG GCGGAGACCC GCAAAGCCGC CTGA
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| Protein sequence | MNDMTDFTMK TDADGVAIIT WDVQGKSMNV MNQQGFEDLD ALVDKALADD TVKGIIITSG
KDSFAGGMDL NVIAKMRDDA GDDPARGLFE GVMAMHGILR KIERAGMDPK TNKGGKPVAA
ALPGTALGIG LEIPLACHRI FAADNPKAKI GLPEIMVGIF PGAGGTMRVS RKLGAMQAAP
ILLEGKLFEP KKAKMAGIVD EVVPAEELLD AAKAWVLSAK DTDIVKPWDL KGYKFPGGAP
YHPAGFMTFV GASAMIHSKT MGVYPAAKAL LSAVYEGAMV PFDTALKIEA RWFTNVLMNP
SSSAMIRSLF INKEALEKGA VRPDVPDQKV KKVGILGAGM MGAGIAYVSA NAGIEVVLID
AAQESADRGK AHAAGILDKG IARKKVTPEK KDEVLARITA TTDYAALEGC DLVVEAVFED
PGVKAEVTAK AEAVIPGDAI FATNTSTLPI SELAKASARP EQFIGIHFFS PVDKMLLVEI
IKGRQTGDVA VAKALDFVRQ IRKTPIVVND ARFFYANRCI IPYINEGIRM VAEGVTPALV
ENAAKLVGMP LGPLQLVDET SIDLGVKIAK ATKAAMGDAY PDGAVDEVLF WMADEGRLGR
KSNAGFYTYD EAGKRGLLWE GLADRYPAAK EQPELTAVQH RLLMAQVLEA VRALEDGVLM
DIREGDVGAI LGWGFAPWSG GPLSWLDMIG AARAVEICDA LTDTHGARFT TPALLREMAE
KGETFYGRFG AETRKAA
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