Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0835 |
Symbol | fadJ |
ID | 5711461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 844051 |
End bp | 846264 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641266744 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_001532181 |
Protein GI | 159043387 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA TGACCGATTT CACCATGAAA ACGGACGCCG ACGGCGTCGC CATCATCACT TGGGACGTCC AGGGCAAATC CATGAACGTC ATGAACCAGC AAGGGTTCGA GGATCTCGAC GCGCTGGTCG ACAAGGCGCT GGCCGATGAC ACCGTCAAGG GGATCATCAT CACCTCCGGC AAGGACAGCT TTGCGGGCGG CATGGACCTC AACGTCATCG CCAAGATGCG CGACGACGCC GGCGACGACC CGGCCCGTGG CCTCTTCGAG GGCGTGATGG CCATGCACGG CATCCTGCGC AAGATCGAGC GCGCCGGGAT GGACCCCAAG ACCAACAAGG GCGGCAAACC CGTCGCCGCC GCCCTGCCCG GCACCGCGCT CGGCATCGGG CTGGAGATCC CGCTCGCCTG TCACCGGATT TTCGCCGCCG ACAACCCCAA GGCCAAGATC GGCCTGCCCG AAATCATGGT CGGCATCTTC CCCGGCGCGG GCGGCACCAT GCGGGTGTCG CGCAAGCTGG GCGCGATGCA GGCTGCGCCC ATCCTGCTCG AAGGCAAGCT TTTCGAGCCG AAAAAGGCCA AGATGGCCGG CATCGTGGAC GAAGTGGTGC CCGCGGAGGA GCTGCTCGAC GCCGCCAAGG CCTGGGTGCT CTCCGCCAAG GATACTGATA TCGTCAAGCC CTGGGACCTC AAGGGCTACA AGTTCCCCGG CGGCGCGCCC TACCACCCGG CGGGCTTCAT GACCTTCGTC GGCGCCAGCG CCATGATCCA TTCCAAGACC ATGGGCGTCT ACCCGGCGGC CAAGGCGCTG CTGAGTGCGG TCTACGAAGG GGCCATGGTT CCCTTCGACA CCGCGCTCAA GATCGAGGCG CGCTGGTTCA CCAACGTCCT GATGAACCCG TCGTCCAGCG CCATGATCCG CTCGCTCTTC ATCAACAAGG AGGCGCTGGA AAAAGGCGCC GTCCGTCCCG ACGTGCCCGA CCAGAAGGTG AAGAAGGTCG GCATCCTCGG CGCGGGGATG ATGGGCGCGG GCATCGCCTA TGTCTCGGCC AATGCCGGGA TTGAAGTGGT GCTGATCGAC GCCGCCCAAG AGTCCGCGGA TCGCGGGAAG GCCCATGCCG CGGGCATCCT CGACAAGGGC ATCGCGCGCA AGAAGGTCAC GCCCGAGAAG AAGGACGAGG TGCTCGCCCG CATCACCGCC ACCACGGACT ATGCCGCCCT CGAAGGGTGC GACCTGGTGG TCGAGGCGGT GTTCGAAGAT CCGGGCGTCA AGGCCGAGGT GACCGCAAAG GCCGAAGCCG TGATCCCCGG CGATGCGATC TTCGCGACCA ACACCTCCAC CCTGCCGATC TCGGAGCTGG CCAAGGCCAG CGCCCGGCCT GAGCAGTTCA TCGGCATCCA TTTCTTTTCG CCCGTGGACA AGATGCTGCT GGTGGAGATC ATCAAGGGGA GACAGACCGG CGATGTGGCC GTGGCCAAGG CGCTCGATTT CGTGCGCCAG ATCCGCAAGA CGCCCATCGT GGTCAACGAC GCGCGGTTCT TCTACGCCAA CCGCTGCATC ATTCCCTACA TCAACGAAGG CATCCGCATG GTGGCCGAGG GCGTCACCCC GGCGCTGGTC GAAAACGCTG CGAAACTGGT GGGCATGCCG CTGGGGCCGC TGCAACTGGT GGACGAAACC TCCATCGACC TGGGCGTCAA GATCGCCAAG GCCACGAAAG CGGCCATGGG CGACGCCTAC CCGGACGGCG CCGTGGACGA GGTGCTGTTC TGGATGGCGG ACGAAGGCCG CCTGGGCCGC AAGTCCAATG CGGGCTTCTA CACCTATGAC GAGGCGGGCA AGCGTGGTCT GCTCTGGGAA GGGCTGGCCG ACCGCTACCC GGCGGCCAAG GAACAGCCCG AGCTGACCGC CGTGCAGCAC CGCCTGCTCA TGGCCCAGGT GCTGGAGGCC GTGCGCGCCC TGGAGGACGG CGTGCTCATG GACATCCGCG AGGGCGACGT GGGCGCCATC CTCGGCTGGG GCTTCGCGCC GTGGTCCGGT GGCCCGCTCA GCTGGCTCGA CATGATCGGC GCCGCCCGCG CGGTGGAGAT CTGCGATGCG CTGACCGACA CCCACGGCGC CCGCTTCACC ACGCCCGCGC TCCTGCGCGA AATGGCCGAG AAGGGCGAGA CCTTCTATGG CCGCTTCGGG GCGGAGACCC GCAAAGCCGC CTGA
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Protein sequence | MNDMTDFTMK TDADGVAIIT WDVQGKSMNV MNQQGFEDLD ALVDKALADD TVKGIIITSG KDSFAGGMDL NVIAKMRDDA GDDPARGLFE GVMAMHGILR KIERAGMDPK TNKGGKPVAA ALPGTALGIG LEIPLACHRI FAADNPKAKI GLPEIMVGIF PGAGGTMRVS RKLGAMQAAP ILLEGKLFEP KKAKMAGIVD EVVPAEELLD AAKAWVLSAK DTDIVKPWDL KGYKFPGGAP YHPAGFMTFV GASAMIHSKT MGVYPAAKAL LSAVYEGAMV PFDTALKIEA RWFTNVLMNP SSSAMIRSLF INKEALEKGA VRPDVPDQKV KKVGILGAGM MGAGIAYVSA NAGIEVVLID AAQESADRGK AHAAGILDKG IARKKVTPEK KDEVLARITA TTDYAALEGC DLVVEAVFED PGVKAEVTAK AEAVIPGDAI FATNTSTLPI SELAKASARP EQFIGIHFFS PVDKMLLVEI IKGRQTGDVA VAKALDFVRQ IRKTPIVVND ARFFYANRCI IPYINEGIRM VAEGVTPALV ENAAKLVGMP LGPLQLVDET SIDLGVKIAK ATKAAMGDAY PDGAVDEVLF WMADEGRLGR KSNAGFYTYD EAGKRGLLWE GLADRYPAAK EQPELTAVQH RLLMAQVLEA VRALEDGVLM DIREGDVGAI LGWGFAPWSG GPLSWLDMIG AARAVEICDA LTDTHGARFT TPALLREMAE KGETFYGRFG AETRKAA
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