| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0826 |
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| Symbol | |
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| ID | 5711452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 832910 |
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| End bp | 835189 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266735 |
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| Product | malic enzyme |
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| Protein accession | YP_001532172 |
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| Protein GI | 159043378 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.214275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTGCCA GCAAAGATGA CAGCGCCCGT CAGGCCGCAC TTTATTACCA CTCGCACCCG
CGGCCCGGCA AGCTGGAGGT GCGCGCGACC AAGCCGCTGG CCAACCAGCT GGACCTGGCG
CGCGCCTATT CCCCCGGCGT GGCCGAGGCC TGCCTGGAGA TCAAGGCCGA TCCGACCGCC
GCCGCACTCT ATACCGGGCG CGGCAACCTG GTGGGCGTGG TCACCAATGG CACGGCCGTT
CTGGGGTTGG GCAATATCGG CAGTCTCGCC TCCAAGCCGG TGATGGAGGG CAAGGCGGTC
CTGTTCAAGA AATTCGCCAA TATCGACTGT TTCGACATCG AGTTGAACGA GAAAGACCCC
GAAAAGCTGG CGGAACTGGT CTGCGCGCTG GAGCCCACCT TCGGGGCGAT CAACCTCGAA
GACATCAAGG CGCCGGACTG TTTCATCGTG GAAAAGATCT GCCGGGAGCG GATGAACATC
CCCGTCTTCC ACGACGACCA GCACGGCACC GCCATCGTGG TGGGCGCGGC AGCAACCAAC
GCCCTGCGCG TGACGGGCCG TACCTTCGAG GATCTCAAGA TCGTCTCCAC CGGGGGCGGG
GCGGCGGGCA TCGCCTGCCT CAACATGCTG CTGAAACTCG GTGTCAAACG CGAGAACGTC
ACCCTGTGCG ACGTGGCGGG CGTGGTCTAC AAGGGCCGCA CCGAAGAGAT GACGCCCCAG
AAGGAAGCCT ATGCCCAGGA CACCGACGCG CGCACCATCG CGGATGTGAT CGCAGGGGCG
GACATGTTCC TCGGCCTCTC GGCCCCCGGG GTGCTCACCC CCGAAATGGT CAGTCAGATG
GCCGATCAGC CGATCATCTT CGCACTGGCC AACCCCACGC CCGAGATCAT GCCCGAACTG
GTCCGCGAGG TCGCCCCGGA CGCGATCATC GCCACGGGGC GCACGGATTA TCCCAACCAG
GTCAACAACG TGCTGTGTTT CCCGTTCATC TTCCGCGGCG CGCTCGACGT CGGCGCGACG
GAGATCAACG ACGCCATGCA GATCGGTTGC ATCGAGGGGA TCGCGGCGCT CGCCCGCGCC
ACCACCAGCG CCGAGGCAGC CGCCGCCTAT CGCGGCGAGC AGATGACATT CGGGCGCGAC
TACCTGATCC CGAAACCCTT CGATCCGCGC CTGATGGGCG TGGTGGCCAC CGCCGTGGCC
CGCGCCGCCA TCGAGTCCGG CGTGGCCGAG CGGCCGATCG AGGATCTCGA CGCCTACAAG
GCCAAGCTGG ACGGGTCGGT CTTCAAGTCG GCCATGATCA TGCGCCCGGT CTTCGAGGCC
GCCGCTCAGG CCGAGCGCAG CATCGTCTTC GCCGAGGGCG AGGACGAGCG GGTGCTGCGC
GCCGCCAACT CGATGATCGA ACAGACCACC GACAAGCCCA TCCTGATCGG GCGGCCCGAG
GTGGTCATCG CCCGCTGCGA GCGCGCGGGC CTGCCGATCC GGCCCGGCAA GGACTTCGAG
CTGGTCAACC CCCAGGACGA CCCGCGCTAT CGCGACTACT GGGAAACCTA CCACGCGATC
ATGGAACGCA AGGGCGTCAC GCCGGACATC GCCAAGGCGA TCCTGCGCAC CAATTCCACC
GCCATCGGCG CGATCATGGT CCATCGCGGC GATGCCGACA GCCTGATCTG CGGCACGTTC
GGGCAATACC TGTGGCATCT GAACTATGTC TGCGAGACGC TGGGACAGGA CGGGCTACAT
CCGGTCGGCG CGCTCAGCCT GATGATCCTG GAGGACGGGC CGCTCTTCAT CGCCGACACC
CATGTCCACG CCACCCCCAC CCCGCAGCAG ATCGCCGAGA CCGTCTGCGG GGCGGCGCGC
CATGTGCGCC GCTTCGGGCT GGAGCCGAAC ATCGCGCTCT GCTCGCATTC GCAGTTCGGC
AACCTGGACA TCGATTCTGG GCGGCGGATG CGCGCGGCGC TGGCGCTTCT GGACGGGATG
AACCTGGATT TCGCCTATGA GGGTGAGATG CACACCGACA GCGCGCTCGA CCCCGAACTG
CGCGCCCGCA TCTTCCCCCA TTCGCGGATG GAAGGGGTGG CCAATGTGCT GGTCTTCGCC
AATTCCGACG CGGCCTCTGG GGTGCGCAAC ATTCTCAAGA TGAAGGCCAA CGGGCTGGAG
GTCGGGCCGA TCCTGATGGG GCTGGGCAAC CGCGCCCATG TGGTCACGCC GTCGATCACC
GCGCGCGGAT TGCTCAACAT GTCGGCCATC GCGGGCACCC CGGTGGCGGT CTACGGCTGA
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| Protein sequence | MSASKDDSAR QAALYYHSHP RPGKLEVRAT KPLANQLDLA RAYSPGVAEA CLEIKADPTA
AALYTGRGNL VGVVTNGTAV LGLGNIGSLA SKPVMEGKAV LFKKFANIDC FDIELNEKDP
EKLAELVCAL EPTFGAINLE DIKAPDCFIV EKICRERMNI PVFHDDQHGT AIVVGAAATN
ALRVTGRTFE DLKIVSTGGG AAGIACLNML LKLGVKRENV TLCDVAGVVY KGRTEEMTPQ
KEAYAQDTDA RTIADVIAGA DMFLGLSAPG VLTPEMVSQM ADQPIIFALA NPTPEIMPEL
VREVAPDAII ATGRTDYPNQ VNNVLCFPFI FRGALDVGAT EINDAMQIGC IEGIAALARA
TTSAEAAAAY RGEQMTFGRD YLIPKPFDPR LMGVVATAVA RAAIESGVAE RPIEDLDAYK
AKLDGSVFKS AMIMRPVFEA AAQAERSIVF AEGEDERVLR AANSMIEQTT DKPILIGRPE
VVIARCERAG LPIRPGKDFE LVNPQDDPRY RDYWETYHAI MERKGVTPDI AKAILRTNST
AIGAIMVHRG DADSLICGTF GQYLWHLNYV CETLGQDGLH PVGALSLMIL EDGPLFIADT
HVHATPTPQQ IAETVCGAAR HVRRFGLEPN IALCSHSQFG NLDIDSGRRM RAALALLDGM
NLDFAYEGEM HTDSALDPEL RARIFPHSRM EGVANVLVFA NSDAASGVRN ILKMKANGLE
VGPILMGLGN RAHVVTPSIT ARGLLNMSAI AGTPVAVYG
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