| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0823 |
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| Symbol | |
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| ID | 5711449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 827784 |
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| End bp | 829175 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266732 |
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| Product | two component, sigma54 specific, transcriptional regulator |
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| Protein accession | YP_001532169 |
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| Protein GI | 159043375 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.34957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGC CGCCTATCCT GCTGATCGAA GACACGCCGT CGCTTCAGCT TGTCTATGAC
GCGATTATCC GGGGGGCCGG GCATGCCGTG ATTTGCGCTG ACACGGCCGA TGCCGGGCTG
ACCGGGTTCA AGACCCACAA GCCCCGTGTC GTCGTGCTCG ACCTGATGCT GCCGGACCGG
GACGGGCTGG AGCTGATGCG CGAATGCCTC GCACTCAATC CCGACGCGCG TTTCGTGGTG
ATCACGGCCA ATGGCTCGAT CAACCGCGCG GTGGAGGCGA TGCGCGGCGG GGCCTATGAA
TTCCTGGTCA AACCCTTCGA CGAGGGCCGT TTCCTCGCCG CGATCGACAA CGCCCTGCGC
GACCATGTCC GCCCGCCCGA GGAAACGCCC GAGGTCCTGA ACGACTTCCG CGGCTTCATC
GGCAGTTCGG ACACAATGCA GGACGTCTAT CGCCGCATCC AGTCGGTCAG CCGGTCCATG
GCCACGGTGT TCATCACCGG CGAGAGCGGC ACCGGCAAGG AGGTCTGCGC GCAGGCGGTC
CATGACAGCT CGACCCGGGC GGGCAAGCCC TTTGTGCCGC TCAATTGCGG GGCGATCCCG
TCGGATTTGC TGGAATCCGA GGTGTTCGGC CATTTGCGCG GGTCCTTCAC CGGTGCCATC
GCCGACAAGA TCGGCGCGGC GGCGGCGGCC GATGGCGGCA CGCTGTTTCT CGACGAGATC
TGCGAGATGG ACCTGAACCT GCAGACCAAG CTGCTGCGGT TCCTGCAGAC CTCGACGATC
CAGCCCGTGG GCGCGACAAG GGCGCGCAAG ATCAACGTGC GGATCATCTG CGCCACCAAC
CGCAACCCGC TGGAAGAGGT CCGCAGGGGC CGGTTCCGCG AGGATCTGTA TTACCGCTTG
CAAGTGGTGC CCATCCACCT GCCCCCCTTG CGCGAACGGG GCGAGGATGT GATCGCCATC
GCCCGCGACG CGGTCCGCAA GTTCGCCGCG GAGGAAGGGC GCCGGTTCAC CGGGCTCGCC
CCGGAGGTCG AGGCCCTGTT CCGCACCCTG CCCTGGCCCG GCAATGTGCG CCAGGTGATC
AACGTGATGC GCAATGTCGT GGTGCTGAAT GACGGCCCGC TGGTGACCCA GACCATGCTG
CCGCTGGAGA TCCTGCACCA CCACGAGGCG ATGACCAACA ATGCCGGGCC GGTCGGCCTG
CCGCCCGAGA AGCCGGTCGT GTCGCTCGAT GGGTTGATGG GCCGGACCAT GGCCGAGATC
GAGCGCATGG TGATCGAAGA GACCATCGCG CGCCATGGCG GGTCCGTGCC CAAGGCCGCG
CGGGTGCTCG ACCTGTCGCC CTCGACGATC TATCGCAAGC GCGAGGCCTG GATGAAGGAC
GCCGCCGAGT AG
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| Protein sequence | MSAPPILLIE DTPSLQLVYD AIIRGAGHAV ICADTADAGL TGFKTHKPRV VVLDLMLPDR
DGLELMRECL ALNPDARFVV ITANGSINRA VEAMRGGAYE FLVKPFDEGR FLAAIDNALR
DHVRPPEETP EVLNDFRGFI GSSDTMQDVY RRIQSVSRSM ATVFITGESG TGKEVCAQAV
HDSSTRAGKP FVPLNCGAIP SDLLESEVFG HLRGSFTGAI ADKIGAAAAA DGGTLFLDEI
CEMDLNLQTK LLRFLQTSTI QPVGATRARK INVRIICATN RNPLEEVRRG RFREDLYYRL
QVVPIHLPPL RERGEDVIAI ARDAVRKFAA EEGRRFTGLA PEVEALFRTL PWPGNVRQVI
NVMRNVVVLN DGPLVTQTML PLEILHHHEA MTNNAGPVGL PPEKPVVSLD GLMGRTMAEI
ERMVIEETIA RHGGSVPKAA RVLDLSPSTI YRKREAWMKD AAE
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