| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0821 |
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| Symbol | glyA |
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| ID | 5711447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 825519 |
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| End bp | 826814 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266730 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001532167 |
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| Protein GI | 159043373 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAC CGCACCGCGA CAATGGCTTC TTCACCGAAA GCCTCGCCAC ACGGGATGCC
GAACTTTTCG GCGCCATCAC CAAGGAGCTG GGCCGTCAGC GCGACGAGAT CGAGCTGATC
GCCTCGGAGA ACATCGTCTC GGCCGCGGTG ATGGAGGCGC AGGGCTCGGT CCTGACCAAC
AAATACGCCG AAGGCTACCC GGGGCGGCGA TATTACGGCG GCTGCCAATA TGTCGACATC
GCCGAAGAGC TGGCGATCGA CCGCGCCAGG CAGCTCTTCG GCTGCGCCTT CGCCAATGTG
CAGCCCAATT CCGGTAGCCA AGCCAACCAG GGCGTGTTCA CCGCCCTGCT GCAGCCGGGC
GACACGATCC TGGGCATGAG CCTCGATGCG GGCGGGCACC TGACCCACGG GGCCAAGCCG
AACCAGTCCG GCAAGTGGTT CAACGCGGTC CAGTACGGGG TGCGCCAGGA TACGCTGGAC
GTGGATTACG ACCAGATCGC CGCACTGGCT GCCGAGCACA AGCCGAAGAT GATCATCGCC
GGCGGCTCGG CCATCCCGCG GATCATCGAC TTCGCCCGGA TCCGCGAGAT CGCCGACAGC
GTCGGCGCCT GGGTGCTGGT GGACATGGCC CATTTCGCGG GGCTGGTGGC GGCGGGGCAT
TACCCCTCGC CGTTCCCGCA CGCCCATGTG GCCACCACCA CGACCCACAA GACCCTGCGC
GGCCCGCGCG GCGGCATGAT CCTGACCGAT GACGAGGCGC TGGCGAAGAA GTTCAACTCC
GCCATCTTCC CGGGCATCCA GGGCGGGCCG CTGATGCATG TGATCGCGGG CAAGGCCGTG
GCCTTCGGCG AGGCGCTGCG CCCGGAATTC AAGACCTACC AGGCCCAGGT GATCGAGAAC
GCCCAGGCGC TGGCCGACCA GCTGATGCAG GGGGGGCTCG ACATCGTCAC CGGCGGGACC
GATACCCATG TCCTGCTCGT GGACCTGCGG CCCAAGGGCG TGAAGGGCAA CGCCACGGAA
AAGGCGCTCG GGCGCGCCCA TATCACCTGC AACAAGAACG GCATCCCGTT CGACACCGAA
AAGCCGATGA TCACCTCCGG TATCCGGCTC GGCTCCCCGG CGGGAACGAC GCGCGGCTTC
GGCACGCCGG AATTCCGCCA GATCGCGGAC TGGATCGTGC GGGTGGTCGA CGGGCTGGCC
GCAAACGGCG AGGACGGCAA TGCCGAGGTC GAGGCCGCCG TGCGCGCCGA GGTGCTGGAG
CTGTGCGGGC GCTTCCCGAT CTATCCCAAC CTCTGA
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| Protein sequence | MNAPHRDNGF FTESLATRDA ELFGAITKEL GRQRDEIELI ASENIVSAAV MEAQGSVLTN
KYAEGYPGRR YYGGCQYVDI AEELAIDRAR QLFGCAFANV QPNSGSQANQ GVFTALLQPG
DTILGMSLDA GGHLTHGAKP NQSGKWFNAV QYGVRQDTLD VDYDQIAALA AEHKPKMIIA
GGSAIPRIID FARIREIADS VGAWVLVDMA HFAGLVAAGH YPSPFPHAHV ATTTTHKTLR
GPRGGMILTD DEALAKKFNS AIFPGIQGGP LMHVIAGKAV AFGEALRPEF KTYQAQVIEN
AQALADQLMQ GGLDIVTGGT DTHVLLVDLR PKGVKGNATE KALGRAHITC NKNGIPFDTE
KPMITSGIRL GSPAGTTRGF GTPEFRQIAD WIVRVVDGLA ANGEDGNAEV EAAVRAEVLE
LCGRFPIYPN L
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