| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0789 |
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| Symbol | kefC |
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| ID | 5711225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 794130 |
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| End bp | 796142 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266698 |
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| Product | potassium efflux system protein |
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| Protein accession | YP_001532135 |
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| Protein GI | 159043341 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00221734 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.126459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAT TTCTGATCGA AGCGACCATA TTCCTGTTGG CGGCGGTCAT TGCCGTGCCG
CTCGCGGTGC GGTTCGGGCT GGGTTCGGTT CTGGGCTACC TGCTGGCCGG AGTCATCATC
GGTCCGGTTC TGGGCCTCGT GGGCACCGAT GTGGAGGAGT TGCAGCATTT CGCCGAGTTC
GGCGTGGTGA TGATGCTGTT CCTGATCGGG CTGGAGCTGG AGCCGCGCGC CCTGTGGGAC
ATGCGCGACC GGCTTCTGGG CCTCGGCGGC TTGCAGATCG GGCTGACCAT GGCGGCGATC
ACCGGCGGCT GCATCTTGCT CGGCTTTGCC TGGCCCGTGA GCCTCGCGAT CGGGATGATC
ATGGCGCTGT CGTCGACCGC GATCGTGTTG CAGACCCTGA ACGAAAAGCG GCTGATGCAG
ACCCCGGGGG GCCGCAGTGC GTTCTCGGTG CTGCTGACCC AGGATATCGC GGTGATCCCG
ATGCTGGCCT TCATGCCGCT TCTGGCGCTG TCGATCCTGC CCCATGCACC GGAGGCCCAA
AGCCCCGCGA GCGGTCTTGC CGGTATCACC GCCGCCCCCG ATGGCAGCGT TCAGCTCGCC
CCGGGCGGCA CCGACGGGCA TGGGCATGAC GATCATTCCG CAACCGCGGT GATGCACCTG
CTGGACCAGT TGCCTGGCTG GGGACTGACC CTCGTCACCA TCGCGGCGAT TGCGGCGATC
ATTCTCGGCG GGCATTACCT GACGCGGCCC GTGTTTCGCT TCATCCATGC GGCCCGGATG
CGCGAGATGA ACACGGCTGT GGCATTGCTC TTCGTGACCG GGGTCGCGTC GCTGATGCTG
ATCGTGGACC TGTCGCCGGC GCTCGGCACC TTCCTGGCGG GCGTGGTGCT GGCCAACTCG
GAGTACCGTC ACGAGCTGGA GGCGGATATC GCGCCCTTCA AGGGACTGCT GCTGGGCCTG
TTTTTCCTCA CTGTCGGGGC GGGGATCAAT TTCGGCGTCC TGTTCGGCGA TCCGGTGCTG
CTGATCTCGC TCACCCTGGG TCTGATGCTG ATCAAGGGAG TGATCCTTCT GGGTCTCGCG
ATACTGTTCA AGATCAGGGG GCGGGATCGC TGGCTCTTCA CCCTCGGTCT CGCCCAGGCG
GGGGAGTTCG GCTTCGTGCT GATCAGCTTC GCGGTGGGTA CCCATGTGTT GCCCGCCGAG
CTGAGCCAGA CCTTGTTGCT GGTGGTGGCA TTGTCGATGC TGCTGACGCC CTTGCTGTTC
ATCGTCTATG ACCAGGTTTC CGCCCGAATG GAGGAAGCCA GCGGGCCGCA ACAGCCCCAT
GACGAGATCG ACGAACAACA GCCGATCATC ATCGCCGGGA TCGGCCGGTT CGGGCAGGTG
GTCAACCGCA TGGTGCAGAT GACCGGGATG AAGACAACGG TGCTCGACCA CGACCTCGAG
ATGATCGAGC TGATGCGGCG CTTCGGGTTC AAGGGGTTCT TCGGCGATCC CACCCGGCCC
GAACTGCTCC ATGCGGCGGG GCTCGACAAG GCGCGGGTGC TGGTGGTGGC GCTCGACGAC
AGGGAGGCGG GGCTGCGCCT GGTGCAATAC GCGCGGCGGA TGCGGCCCGA CCTGCATATC
GTCGCCCGCG CCCGGGACCG GGTGCATGTC TACGAGCTCT ATGCCGCTGG GGCCAATGAC
ATCGTGCGCG AGACCTTCGA CAGCTCCCTG CGGGCCGCGC GCTACGTGCT GGAAAACATG
GGGATGAGCG AGTTCGACGC CGCGGATGCA GAGCACACGT TCTTCCGGAT GGACCGCAAG
GCGATGCGCG ATCTGGCGGT GCTCTGGAAG CCGGGCGTGC CGGTCACCGA GAACACGGCC
TATGTGACAC GCGCCAAGGA GCTGAACCGC GACCTGGAGA CCGCGCTGGT CAGCACCCTA
GACGAGGGCA AGGCGGTGAC CGGGTACAGC GACCGGTTCG CGACGCTGGA ATCCGAGACC
GCGATGAAGC AAAGCCGCAA GCCCACCGCC TGA
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| Protein sequence | MTAFLIEATI FLLAAVIAVP LAVRFGLGSV LGYLLAGVII GPVLGLVGTD VEELQHFAEF
GVVMMLFLIG LELEPRALWD MRDRLLGLGG LQIGLTMAAI TGGCILLGFA WPVSLAIGMI
MALSSTAIVL QTLNEKRLMQ TPGGRSAFSV LLTQDIAVIP MLAFMPLLAL SILPHAPEAQ
SPASGLAGIT AAPDGSVQLA PGGTDGHGHD DHSATAVMHL LDQLPGWGLT LVTIAAIAAI
ILGGHYLTRP VFRFIHAARM REMNTAVALL FVTGVASLML IVDLSPALGT FLAGVVLANS
EYRHELEADI APFKGLLLGL FFLTVGAGIN FGVLFGDPVL LISLTLGLML IKGVILLGLA
ILFKIRGRDR WLFTLGLAQA GEFGFVLISF AVGTHVLPAE LSQTLLLVVA LSMLLTPLLF
IVYDQVSARM EEASGPQQPH DEIDEQQPII IAGIGRFGQV VNRMVQMTGM KTTVLDHDLE
MIELMRRFGF KGFFGDPTRP ELLHAAGLDK ARVLVVALDD REAGLRLVQY ARRMRPDLHI
VARARDRVHV YELYAAGAND IVRETFDSSL RAARYVLENM GMSEFDAADA EHTFFRMDRK
AMRDLAVLWK PGVPVTENTA YVTRAKELNR DLETALVSTL DEGKAVTGYS DRFATLESET
AMKQSRKPTA
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