| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0788 |
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| Symbol | cobT |
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| ID | 5711224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 793089 |
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| End bp | 794126 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641266697 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001532134 |
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| Protein GI | 159043340 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00128577 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.121993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCC TGCCGCCCCC CTCCGATGCT CCCTTCACGA CCCTCAGCGC CTTCCGCGCG
GCCCTTGCAC ATGCACCGGG GCCGAATGGC CCGGCCGAGG CCCGGGCGCG GGCCCGCAAC
GGCGTGCTGA CCAAGCCGCC CGGGGCGCTC GGACGTCTTG AGGATCTGGC GATCTGGGTG
GCGTCCTGGC AGGGGACCGA GACGCCGCGC CTCGATGCGC CCCAGGTGGT GATCTTCGCA
GGCAATCACG GGGTGACGGC ACGGGGGATC TCGGCCTTTC CCGCCGAGGT GACGGCCCAG
ATGGTCGCCA ACTTCGAGGC CGGAGGGGCC GCGATCAACC AGCTCTCGCA GGCCTTCGGG
GCGCAGATGA CGGTGCAGGC GCTGGATCTG GACAGGCCGA CGGCGGATTT CACCCAAGGC
CCCGCCATGA CCGAGGCCGA GGTGGTCGCG GCCCTCGCCA CGGGCTGGCA GGCGGTCGAT
CCCACGGCGC ATGTGCTGGT GGCAGGGGAG ATGGGGATCG GAAACACCAC CGTGGCGGCG
GCCCTGTGTG CGGCCCTCTA CGGCGGCGAC GCGGAGGGGT GGGTCGGGCG TGGCACGGGC
GTCGACGACG CGGGCCTCGC GCGCAAGGCC GACGCGGTGC GCGCGGCACT TGCGGTCAAC
GCGGGGGCGC TGGGCGATCC GCTGGAGGTG CTGCGCTGCC TCGGCGGACG GGAGCTCGCG
GCCATGGCCG GGGCCATCGC GCGGGCGCGC GGCGAGGGGA TCCCGGTGAT CCTCGACGGG
TTCATCTGCT GTGCGGCGGC AGCCTGCCTG GCCGAGGCGG TGCCGGGCGC GCTCGATCAC
GCGGTGGCGG GGCACCTGTC GGCCGAAGGC GGGCATGAGG CCCTGCTGGC GCGGCTGGAC
AAAACGCCGC TGTTGTCGCT TGGCCTGCGT CTCGGCGAAG GCTCCGGCGC GGCGCTGGCG
CTGGGCATCC TTCAGGGCGC GGTCGCGTGC CATTCCGGCA TGGCGACCTT CGCCGAGGCG
GGGGTGTCCG ACGGCTGA
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| Protein sequence | MSSLPPPSDA PFTTLSAFRA ALAHAPGPNG PAEARARARN GVLTKPPGAL GRLEDLAIWV
ASWQGTETPR LDAPQVVIFA GNHGVTARGI SAFPAEVTAQ MVANFEAGGA AINQLSQAFG
AQMTVQALDL DRPTADFTQG PAMTEAEVVA ALATGWQAVD PTAHVLVAGE MGIGNTTVAA
ALCAALYGGD AEGWVGRGTG VDDAGLARKA DAVRAALAVN AGALGDPLEV LRCLGGRELA
AMAGAIARAR GEGIPVILDG FICCAAAACL AEAVPGALDH AVAGHLSAEG GHEALLARLD
KTPLLSLGLR LGEGSGAALA LGILQGAVAC HSGMATFAEA GVSDG
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