| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0787 |
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| Symbol | cobS1 |
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| ID | 5711223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 792216 |
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| End bp | 792992 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641266696 |
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| Product | cobalamin-5-phosphate synthase CobS |
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| Protein accession | YP_001532133 |
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| Protein GI | 159043339 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00056745 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0562894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCGCC CCCGCCTTGT CGATCTCGGG ATCGCCCTGA GCCTGCTGAG CCGGGTGCCG
GTGCCGCTGG ACCATGCCGC CGCCGGGACC CGCGCGGCGC AGGCGGCCTG GGCCTATCCG
CTGGTGGGCG CGGCTTTGGG CGGTGCGGCG GGCGGGCTGG GCTGGGCGTT GGCGGCGATT
GGCGTGCCGG CGGGCCCTGC CGCCGCGGTC ATGCTCGCCG CGCTGGTCAT GGTGACCGGG
GCGTTACACG AGGACGGGCT GGCCGACAGT GCCGACGGGC TCTGGGGCGG CTGGGACGCA
GCGCGACGGC TGGAGATCAT GCGCGACAGC CGGATCGGCG CCTACGGAGT GTTGGCGCTG
GGACTGGGGC TGCTGCTGCG CTGGAGCTGC CTTGCGGCGC TGCTGGCCGA GGCCGGACCG
GTTGCCACGC TGGCCGCCCT GGTCGCGGTG GGGGCGATGT CCCGCGCAGC CATGGTGGGC
GTGATGCGGG CCCTGCCCCT CGCACGAAAT GACGGGCTTT CGCACAGGGT GGGCACCGTG
CCCGGCTGGG CCGCCGGGCT GGCCGCGGCG GTCGGCCTTG GCACCGGCCT CGCGGTTCTG
GGACCGGTGG CGGCGGTGGT TCTGGGGTTT GCGGGCGGGA TCGCCGCGAT CCTGGTTGGG
CGGCTGGCCC GGTCCCGGAT CGGTGGGCAG ACCGGGGATA TCCTGGGCGC CACGCAGCAG
GTTGCCGAGA TCCTCGGACT TTTGGCGCTC GCGACGTTTG TTGCCCAGAG CACATGA
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| Protein sequence | MSRPRLVDLG IALSLLSRVP VPLDHAAAGT RAAQAAWAYP LVGAALGGAA GGLGWALAAI
GVPAGPAAAV MLAALVMVTG ALHEDGLADS ADGLWGGWDA ARRLEIMRDS RIGAYGVLAL
GLGLLLRWSC LAALLAEAGP VATLAALVAV GAMSRAAMVG VMRALPLARN DGLSHRVGTV
PGWAAGLAAA VGLGTGLAVL GPVAAVVLGF AGGIAAILVG RLARSRIGGQ TGDILGATQQ
VAEILGLLAL ATFVAQST
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