| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0786 |
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| Symbol | |
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| ID | 5711222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 791654 |
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| End bp | 792166 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266695 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001532132 |
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| Protein GI | 159043338 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000100342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0526342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG CGAACAAATC CAACGAATTC CGTCCCAACG AATACGTGGT GTATCCGGCC
CATGGGGTTG GACAGATCGT GTCGATCGAG GAGCAGGAAG TCGCCGGACT GACGCTTGAG
CTGTTCGTGA TCTCCTTCGA AAAAGACAAG ATGACCCTGC GGGTGCCCAC GAACAAGGCG
ACCGAGGTCG GGATGCGGAG CCTGTCGAGC CCCGACATCG TGTCGAAGGC CATGGACACG
CTCAAGGGCA AGGCGCGGGT CAAGCGCGCC ATGTGGTCCC GCCGCGCGCA GGAATATGAG
CAGAAGATCA ATTCCGGGGA CCTGATCGCC ATTGCCGAAG TGGTGCGCGA CCTGCACCGC
AATGACGACC AGCGCGAGCA GAGCTATTCC GAGCGCCAGC TCTACGAGGC GGCGCTGGAG
CGGCTGACGC GCGAGATCGC GGCCGTCAGC GGCGATGACG AGGGCAACGC CCAGAAGCGG
GTCGATGACG TGCTGGTGTC GCGCGCGGCC TGA
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| Protein sequence | MSKANKSNEF RPNEYVVYPA HGVGQIVSIE EQEVAGLTLE LFVISFEKDK MTLRVPTNKA
TEVGMRSLSS PDIVSKAMDT LKGKARVKRA MWSRRAQEYE QKINSGDLIA IAEVVRDLHR
NDDQREQSYS ERQLYEAALE RLTREIAAVS GDDEGNAQKR VDDVLVSRAA
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