| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0775 |
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| Symbol | ttuC |
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| ID | 5711210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 780036 |
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| End bp | 781115 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266683 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001532121 |
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| Protein GI | 159043327 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.731125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.188776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA ACGCCTACCG CATCGCAGTC ATTCCCGGCG ACGGGATCGG GACCGAGGTC
GTGCCCGAGG GGCTGAAGGT TCTGACGGCG GCGGCGCGCA AGTTCGATAT CGGGCTCGAG
TTCGAGACCC ATGATTTCGC GTCCGCGGCC TATTACCAGG CCCATGGCCA GATGATGCCC
GATGACTGGA AATCCCGGAT CGGCGACAGC GATGCGCTCT ATTTCGGGGC TGTGGGTTGG
CCCGACATGG TGCCGGATCA TGTGTCGCTC TGGGGATCCC TGCTGAAGTT CCGGCGGGAG
TTCGACCAGT ATGTCAACCT GCGCCCCGTG CGGCTCATGC CCGGGGTGAC CTCGCCTCTC
GCGGGTCGCG CGCCGGGTGA GATCGACTTC TGGGTGGTGC GCGAAAATAC CGAAGGAGAA
TACTCGTCCA TCGGTGGGCG CATCTTCGAG GGCACAGAGC GGGAAACCGT GATGCAGGAA
ACGGTGATGA CCCGTGTCGG TGTGGACCGC GTCCTGCGCT TTGCCTTCGA ACTGGCGCAG
AGCCGGCCGA AGAAGCACCT GACCTCGGCC ACCAAGTCGA ACGGCATTTC CATCACCATG
CCCTATTGGG ACGAGCGGGT GGTCGAGATG GCGAAGGGAT ATCCGGAGGT CGCGGTCGAC
AAGTATCATA TCGATATCCT GACCGCGCAC TTCGTGTTGC ACCCCGACTG GTTCGACGTG
GTCGTCGCCT CGAACCTGTT CGGAGACATC CTGTCGGACC TCGGCCCGGC CTGCACGGGG
ACCATCGGCA TCGCGCCCTC CGGCAACATC AACCCGGAGC GCGATTTCCC GTCGCTGTTC
GAACCGGTCC ACGGCTCTGC CCCGGATATC GCGGGCAAGG GCATCGCCAA TCCGGTGGGC
CAGGTCTGGG CGGGGGCGAT GATGCTGGAT CATCTCGGGC AGGGCGAGGC CGCCGCCGCG
ATCGTCGCGG CCCTCGAAGA GGTGCTCGCG GACCCGGTGC GTCGGACCGC CGATCTCGGT
GGACAGGCGG GAACGGTGGC CTGTGGTGAT GCGATCGTCG CGGCCCTCGA AAGGCTGTGA
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| Protein sequence | MSRNAYRIAV IPGDGIGTEV VPEGLKVLTA AARKFDIGLE FETHDFASAA YYQAHGQMMP
DDWKSRIGDS DALYFGAVGW PDMVPDHVSL WGSLLKFRRE FDQYVNLRPV RLMPGVTSPL
AGRAPGEIDF WVVRENTEGE YSSIGGRIFE GTERETVMQE TVMTRVGVDR VLRFAFELAQ
SRPKKHLTSA TKSNGISITM PYWDERVVEM AKGYPEVAVD KYHIDILTAH FVLHPDWFDV
VVASNLFGDI LSDLGPACTG TIGIAPSGNI NPERDFPSLF EPVHGSAPDI AGKGIANPVG
QVWAGAMMLD HLGQGEAAAA IVAALEEVLA DPVRRTADLG GQAGTVACGD AIVAALERL
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