| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0762 |
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| Symbol | aspC |
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| ID | 5711197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 771187 |
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| End bp | 772389 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266670 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_001532108 |
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| Protein GI | 159043314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.281955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCC TTTCGACCTC TCTCGCCCGT GTCAAACCGT CGCCGACCAT CGCGGTGACC
AACATGGCAA ACGAGCTCAA GGCCGCCGGG CGGGACGTGA TCGGTCTCGG CGCCGGTGAA
CCCGATTTTG ACACGCCCCA GAACATCAAG GATGCCGGAA AAGCGGCCAT CGATGCCGGG
AAAACGAAAT ACACCGCAGT GGACGGCATC CCCGAGCTGA AAAAGGCGAT CGTCGCGAAG
TTCAAGCGCG ACAATGGCCT GGACTATGAC ACCACGCAAG TGACCGTGGC CAATGGCGGC
AAGCAGATCC TGATCAACGC GCTGATGGCG ACCATGAACC CCGGCGACGA GGTGATCATC
CCCGCGCCCT ACTGGGTGAG CTACCCGGAC ATGGTGCTCC TGGCGGGCGG CGAGCCGGTG
ATCGCGGAGG CCTCGATCCA GACCGGCTTC AAGCTGACCG CCGACCAGCT GGAGGCGGCG
ATCACGCCCC GCACCAAGTG GTTCATCTTC AACTCGCCGT CGAACCCCAC CGGGGCGGGC
TACACCGCCG CCGAGCTCAA GGAACTGACC GATGTGCTGC TGCGCCACCC CCATGTCTGG
GTGATGACCG ACGACATGTA CGAGCACCTG GTCTATGACG ATTTCGAGTT TGCCACCCCC
GCCCAGGTGG AGCCGAAACT CTACAACCGC ACCCTGACCT GCAACGGGGT CTCCAAGGCC
TATGCCATGA CCGGCTGGCG GATCGGCTAT GCCGCGGGCC CCAAGGAGCT GATCGGCGCG
ATGCGCAAGA TCCAGTCCCA GTCCACCTCC AACCCCTGCT CGATCAGCCA ATGGGCCGCG
GTCGAGGCCC TCGACGGCAC CCAGGACTAC ATCCCCGAGA ATAACAAGAC CTTCAAACGC
CGCCGCGACC TGGTGGTCGG CATGCTCAAC GACGCCCAGG GGATCAGCTG CCCGAAACCC
GAGGGCGCGT TCTACGTCTA TCCCTCCATC GCGGGCTGCA TCGGCAAGAC TTCCGCCGGG
GGCACCAAGA TCACCGATGA CGAGGCCTTC GCCAAGGCCC TGCTGGAGGA AAAAGGCGTC
GCCGTGGTCT TCGGCGCGGC CTTCGGGCTC AGCCCCAATT TCCGGGTCAG CTACGCCACC
TCCGACGACG CCCTGACCGA AGCCTGCACC CGCATCCAGG ACTTCTGCGC AGGGCTCAGC
TGA
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| Protein sequence | MSFLSTSLAR VKPSPTIAVT NMANELKAAG RDVIGLGAGE PDFDTPQNIK DAGKAAIDAG
KTKYTAVDGI PELKKAIVAK FKRDNGLDYD TTQVTVANGG KQILINALMA TMNPGDEVII
PAPYWVSYPD MVLLAGGEPV IAEASIQTGF KLTADQLEAA ITPRTKWFIF NSPSNPTGAG
YTAAELKELT DVLLRHPHVW VMTDDMYEHL VYDDFEFATP AQVEPKLYNR TLTCNGVSKA
YAMTGWRIGY AAGPKELIGA MRKIQSQSTS NPCSISQWAA VEALDGTQDY IPENNKTFKR
RRDLVVGMLN DAQGISCPKP EGAFYVYPSI AGCIGKTSAG GTKITDDEAF AKALLEEKGV
AVVFGAAFGL SPNFRVSYAT SDDALTEACT RIQDFCAGLS
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