| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0755 |
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| Symbol | |
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| ID | 5711190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 765229 |
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| End bp | 766599 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641266663 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001532101 |
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| Protein GI | 159043307 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0124459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.621342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGA CGCTCACCTC CTTCGGCCAT GCCCGCGCGA TCCTGAAACT GGGTCTGCCG
TTGATCGGCA GTCACATGGC GCAGATCGCG ATTTCGGCCA CGGATACGGT GATGCTCGGC
TGGTATTCCG CCGAGGCGCT GGCGGCGGTG GTGCTGGGTT CGTCCTCGAT CTTCTTTGCG
TTGCTGATCG TGGGCTCGGG CTTTGCCTGG GCGGTGATGC CCATGGTGGC CAAGGCCGCG
AGCGAGGGCG ACGAGGTGCA GATCCGGCGG GTGACGCGGA TGGGCTTCTG GCTGGTGCTG
ATCTTTGCCG CGGTGGTCAC GCCGCCGATG CTGTGGTCGG CGCCCTGGCT GGTCGCGCTG
GGGCAGGACC CGGGCACTGC GCAGCTGACC CAGGAGTACC TGCGGATCGC GGGGCTGGCG
CTGGGTCCGG GGCTGCTGGT CATGGTGCTG AAGGGATATC TCTCGGCGCT GGAGCGGACG
CAGGTCGTTC TCTGGGTCAC GATCGGGGCG GCGGTGCTGA ACGCGGGGCT GAATTACGTG
CTGATCTTCG GGCGGCTGGG GATGCCGGAG CTGGGGATCC GGGGTGCAGC GCTGGCGTCC
CTGAGCCTGC ATCTGGTGTC GCTGGTGGCG CTGGTGATCT ATGCCCGGCG CAAGCTGCCC
GAGCATGACC TGTTCCGGCG GCTCTGGGTG CCGGACTGGT CGGCGTTCCG GGCGGTGTAC
CGGCTGGGCT GGCCAATCAG CGTCACGAGT TTCGCCGAGA GCGGGATGTT CGCGGCCTCG
GCCATGATGA TGGGCGCCAT CGGGACCCTG CACCTGGCGG CCCATGGCAT CGCGCTGCAG
ATGGTGGCGA TCACCTTCAT GGTGCATGTC GGCCTAAGCC AGGCCGCGAC CGTGCGGGCG
GGCCGGGCGC TGGGGCTCGG GGATGCGGCC GCACTCAAGC GCGGCGGGGC GGTGGCGATC
GCCCTGTCGG CGGGGTTCTC TCTGTGCACG GTGGTGGTGT TCGTGACCAT GCCGGAGGTT
CTGATCGGGG CTTTCCTGTC GCCGGATGAG CCCGCGCGGG CCGAGATCCT GGGCATCGGG
ATTGCGTTGC TGTTCATGGC GGCCCTGTTC CAGTTCGCGG ACGGGGCGCA GATCATGGCG
CTGGGCCTGT TGCGCGGGGT GCAGGACACG CGGGTGCCCA TGGTGATCGC GGCGCTGGCC
TATTGGGGGG TGGGCTTGCC CGTGGGGTTT GTCCTGGGGT TCTACACGCC GCTGGCCGGG
GTCGGGATCT GGGCCGGGCT GGTGGTCGGG CTGGCGCTGG CGGCGATGTT GTTGATGTGG
CGGTTCTGGG GGCGTCGCGG CTGGCAGGCG CGGGGCCTAG TGCGGGAGTA G
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| Protein sequence | MSQTLTSFGH ARAILKLGLP LIGSHMAQIA ISATDTVMLG WYSAEALAAV VLGSSSIFFA
LLIVGSGFAW AVMPMVAKAA SEGDEVQIRR VTRMGFWLVL IFAAVVTPPM LWSAPWLVAL
GQDPGTAQLT QEYLRIAGLA LGPGLLVMVL KGYLSALERT QVVLWVTIGA AVLNAGLNYV
LIFGRLGMPE LGIRGAALAS LSLHLVSLVA LVIYARRKLP EHDLFRRLWV PDWSAFRAVY
RLGWPISVTS FAESGMFAAS AMMMGAIGTL HLAAHGIALQ MVAITFMVHV GLSQAATVRA
GRALGLGDAA ALKRGGAVAI ALSAGFSLCT VVVFVTMPEV LIGAFLSPDE PARAEILGIG
IALLFMAALF QFADGAQIMA LGLLRGVQDT RVPMVIAALA YWGVGLPVGF VLGFYTPLAG
VGIWAGLVVG LALAAMLLMW RFWGRRGWQA RGLVRE
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