| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0749 |
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| Symbol | |
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| ID | 5711184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 758372 |
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| End bp | 760336 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266657 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001532095 |
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| Protein GI | 159043301 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.120428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.923958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACG ACCTTCTCTC GGGCGCGCGC GCCGACACCG CCGCCACCTA TGACGCCTCC
TCGATCCAGG TGCTGGAAGA CATGGAACAT GTCCGCCTCC GCCCCGGCAT GTATATCGGC
GGCAAGGACG ACCGCGCGCT CCACCACATG GTGGCCGAGA TCATCGACAA CTCCATGGAC
GAGGCGGTCG CGGGCCACGC CACCTGGATC GAGGTCGAGC TGCACGCCAA CGGCCATGTC
TCCGTACGCG ACAACGGCCG CGGCATCCCC ACCGACCCGC ACCCGAAAAC CCCCGACAAA
TCCGCGCTGG AGGTGATCTT CTGCACCCTC AACGCGGGCG GCAAGTTCTC CGGCGACAGC
TACGAGACCT CGGGCGGCCT GCACGGCGTC GGCTCCTCGG TGGTCAACGC GCTCAGCGAC
CACCTCCGCG TGGAAGTCGC CCGCAACCGC GAGCTTTACG CCATGGAATT CTCCCGCGGC
GTCCCCCAGG GCAAACTGGC GAAAATCGGC GCCGCCCCCA ACCGCCGCGG CACCGCCGTC
ACCTTCCACC CGGACCCGGA GATCTTCGGC TCCCTCGCCC TCAAACCAGC GCGCCTGTTC
AAGATGGCCC GCTCCAAGGC CTACCTCTTC TCCGGGGTCG AGATCCGCTG GAAAACCGCC
ATCGACGACG GCGACACGCC CGAGGAGGCC ACCTTCCACT TCCCCGGCGG GCTCAGCGAC
TACCTCAACG AAACACTCGG CCAGGCCGCC ACCTATGCCG ACGCGCCGTT CTCCGGCACC
GTGTCGTTCG AGAAATTCGG CCGCCCCGGC AAGGTCGAAT GGGCCATCAA CTGGACCCCG
GCCCGCGACG GCTTCATCCA GTCCTACTGC AACACCGTCC CCACGCCGGA GGGCGGCACC
CACGAGGCGG GCTTCTGGGC CGCCATCCTC AAGGGCATCA AGGCTTACGG CGAGCTTGTC
TCGAACCGCA AGGCCAGCAC CATCACCCGC GAGGACCTGA TCACCGGCGC GGGCGCGCTC
GTGTCCTGCT TCATCCGGGA GCCGGAATTC GTCGGCCAGA CCAAGGACCG CCTCGCCACC
GTCGAGGCCC AGCGCATGGT CGAGAACGCC GTGCGCGACC ACTTCGACAA CTGGCTCGCC
GCCGACACCA AATCCGCCGG CGCCATCCTC GACTTCCTCG TCCTGCGCGC CGAGGAACGC
CTCCGCCGCC GCCAGGAAAA GGAAACCGCC CGCAAATCAG CCACCAAGCG CCTGCGCCTG
CCCGGCAAGC TGGTGGACTG CTCCGCCACC AACCGCGCGG GTACGGAACT GTTCATCGTC
GAGGGCGACA GCGCGGGCGG CTCCGCCAAG ATGGCCCGCG ACCGCAAGAC CCAAGCCCTC
CTACCCCTGC GCGGCAAGAT CCTCAACGTC CTCGGTGCCG CGTCCTCGAA ACTCGGCTCC
AACCAGGAGA TCAGCGATCT GACCCAGGCC CTCGGCGTCG GGCTCGGCAG CAAATTCAAC
ATCGAGGATC TGCGCTACGA CAAGATCATC ATCATGACCG ACGCCGACGT GGACGGCGCC
CATATCGCGT CCCTGCTGAT GACCTTCTTC TTCACCCAGA TGCGCCCGAT GATCGACGCA
GGCCACCTCT ATCTGGCCTG CCCGCCCCTC TTCCGCCTGA CCCAAGGCGC GAAACGGGTC
TATTGCCTCG ACGAGGCCGA ACGCGACGCC TGGCTGGAAA AAGGCCTCGG CGGCAAAGGC
AAGATCGACG TGAGCCGCTT CAAGGGCCTG GGGGAGATGG ACGCCAAGGA CCTCAAGGAC
ACCACCATGA ACCCCGAAAC CCGGAAGCTG ATCCGGGTGT CCATCGACGA GGACGAGCCG
GGTGAGACGG GGGATCTGGT CGAGCGGCTG ATGGGGAAGA AACCGGAGAA GCGCTTCGAG
TATATCCAGG AGAACGCCCG GTTCGTGGAG GAGTTGGATG TTTGA
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| Protein sequence | MANDLLSGAR ADTAATYDAS SIQVLEDMEH VRLRPGMYIG GKDDRALHHM VAEIIDNSMD
EAVAGHATWI EVELHANGHV SVRDNGRGIP TDPHPKTPDK SALEVIFCTL NAGGKFSGDS
YETSGGLHGV GSSVVNALSD HLRVEVARNR ELYAMEFSRG VPQGKLAKIG AAPNRRGTAV
TFHPDPEIFG SLALKPARLF KMARSKAYLF SGVEIRWKTA IDDGDTPEEA TFHFPGGLSD
YLNETLGQAA TYADAPFSGT VSFEKFGRPG KVEWAINWTP ARDGFIQSYC NTVPTPEGGT
HEAGFWAAIL KGIKAYGELV SNRKASTITR EDLITGAGAL VSCFIREPEF VGQTKDRLAT
VEAQRMVENA VRDHFDNWLA ADTKSAGAIL DFLVLRAEER LRRRQEKETA RKSATKRLRL
PGKLVDCSAT NRAGTELFIV EGDSAGGSAK MARDRKTQAL LPLRGKILNV LGAASSKLGS
NQEISDLTQA LGVGLGSKFN IEDLRYDKII IMTDADVDGA HIASLLMTFF FTQMRPMIDA
GHLYLACPPL FRLTQGAKRV YCLDEAERDA WLEKGLGGKG KIDVSRFKGL GEMDAKDLKD
TTMNPETRKL IRVSIDEDEP GETGDLVERL MGKKPEKRFE YIQENARFVE ELDV
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