| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0731 |
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| Symbol | mnhD |
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| ID | 5711166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 740109 |
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| End bp | 741644 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266639 |
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| Product | quinone dependent NADH dehydrogenase |
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| Protein accession | YP_001532077 |
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| Protein GI | 159043283 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.156813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCG TCTGGCCCAT CGTCATCCCG ATGATCACGG CGGTGATCAC GCTGCTCTTG
CGCAAGACCG CGCTGGCCTA TCACGTGTCC CTTCTGGGGT CCGTGGCGCT GCTCGGCTCC
GGGCTGATCC TGTTGCGGGC GGTGCTGACC GGTGGCCCCA TGGCCGCGCA GATGGGCGGC
TGGGAGGCAC CGTTCGGCAT CACGCTCTTT GCCGATATCC TGTCGGCGGC GATGGTGGTC
ATCGCGGGCA TCGTGGCGGT CGCGGTGATC GTCTACAGCC GGTTCGACGT GACCGAGGAT
GAAAAACGCG TGGGCTTTCA TGCCCTGAGC CATGCCCTGC TGGTCGGGGT CTGCGGTGCG
TTCCTGACCG GCGATATCTT CAACCTCTAT GTCTGGTTCG AGGTGATGCT GATCGCGTCC
TTCGGCCTGC TGGTGATCGG CGGGCGGCGG GACCAGATCG ATGCGGCGGT GAAATATGTC
GGTCTGAACC TGGTGGCCAC GCTCGCCTTC CTGACCGGCG TCGGGATCCT CTATGGCGCG
GCGGGCACGC TGAACATGGC CGACCTGCAC CTGGTGCTCG CGGACCGGCA GTCCGAGACC
GCCGTGCTGG CCTCCGCGGC GCTCTTGCTG TTCGCGTTCG GGGCCAAGGC CGCGATGTTC
CCGGTCTTTG CCTGGCTGCC CGCGTCCTAT CACACGCCGG CCTTTGCGAC CTCGGCGCTT
TTTGCGGCGC TGCTGACCAA GGTGGGGGTC TATGCGCTCC TGCGGGTGTT CACGGTGGTC
TATGACGGCG GCGGCGGCTT CATTCAGCCG ATCCTGCTGA TCGGTGCGGT GCTGACCATG
GTGATCGGCG TGCTCGGGGC CGCGGCGCAG AACGATGTGC GTCGCATCCT GTCGTTCCAC
ATCATCAGCC AGATCGGCTA CATGGTGCTG GGCCTTGCCC TCTTCACGCC TTTGGCGATC
ATCGGGGCGA TCTTCTACCT GTTCCATCAT ATCATCGTGA AGGCCAACCT GTTCTTCGTG
GCGGGCCTGA TCAAGCTGAA GGCCGGGTCG GAGGAGCTCG ACAAGATCGG CGGGTTGCTG
AAAGCCTCGC CCTTTCTGGC CATCCTGTTC CTGATCCCCG CGCTCAGCCT CGCGGGCATC
CCGCCGCTCT CGGGTTTCTG GGCGAAGTTT ATCATCGTGC AGGCGAGCCT GGAGGCGCGC
GACTGGTGGG TGGCGCTGGC AGCCCTGGCC GTGGGGCTGA TCACGCTCTT CTCGATGACG
AAGATCTGGC TCGCGGCCTT CTGGAAGGAT CATCCGGACG CGGCCTTCGC CAAGGGCCCC
GTCATGCCGC GCAGCATGAC CGCCCCGATC GCGGTACTGG CGGTGATGAC GGTGATCATC
GGTCTCGGCG CCGGGCCGCT CTATACCGTG GCCGAGGAGG CGGCGATCAC GCTGCTGGAT
CCGCTGGCTT ATGTCGAGGT CGTGCTGGGG CCCGAGGTGG CCGAGACCGC CCGGGCCGAG
CGGGCGGCGA CCCAACTGGC GGAGGTGTCG CAATGA
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| Protein sequence | MILVWPIVIP MITAVITLLL RKTALAYHVS LLGSVALLGS GLILLRAVLT GGPMAAQMGG
WEAPFGITLF ADILSAAMVV IAGIVAVAVI VYSRFDVTED EKRVGFHALS HALLVGVCGA
FLTGDIFNLY VWFEVMLIAS FGLLVIGGRR DQIDAAVKYV GLNLVATLAF LTGVGILYGA
AGTLNMADLH LVLADRQSET AVLASAALLL FAFGAKAAMF PVFAWLPASY HTPAFATSAL
FAALLTKVGV YALLRVFTVV YDGGGGFIQP ILLIGAVLTM VIGVLGAAAQ NDVRRILSFH
IISQIGYMVL GLALFTPLAI IGAIFYLFHH IIVKANLFFV AGLIKLKAGS EELDKIGGLL
KASPFLAILF LIPALSLAGI PPLSGFWAKF IIVQASLEAR DWWVALAALA VGLITLFSMT
KIWLAAFWKD HPDAAFAKGP VMPRSMTAPI AVLAVMTVII GLGAGPLYTV AEEAAITLLD
PLAYVEVVLG PEVAETARAE RAATQLAEVS Q
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