| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0728 |
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| Symbol | mnhA |
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| ID | 5711163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 737004 |
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| End bp | 739244 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266636 |
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| Product | quinone dependent NADH dehydrogenase |
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| Protein accession | YP_001532074 |
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| Protein GI | 159043280 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGGC TCCTGACTCT TGTTCCCGCA GCTCTGATGG CTCTGACCGC GGCGTGGTTC
GCGCAGTTCA TCCCCCAGGT CGCCTCCGGA GAGATCCTGA CCTGGTCGCG GCCCTGGATT
CCCGGCCTCG ACATCGAGGT CGCCTTCCTG CTGGATGGCC TGTCGATGCT GTTCGCGCTG
ATGGTGACGG GGATCGGTGC GATCATCTTC CTCTATTCCG CGGTCTATTT CAAAGGGCAT
CCGAAGCTGA CCATGCTTCT GACGCTTCTG TTCCTGTTCG CGGTGTCCAT GCTGGGCATG
GTGCTGGCCG ACGACATGGT CACCTTCTTC GTGTTCTGGG AGGGCACGAC GATCACGTCC
TTCCTGCTCG TGGGTTTCGA CCACGAGAAA ACCAAGGCGC GCGACAACGC TCTGCAGGCG
CTGCTGGTCA CGGGGCTGGG TGGTCTGGCC TTGTTGGCGG GGCTGATCCT GCTGGGGGCT
GAGGCTGGCA CCTTCCGGAT CTCCGAGATG AACGCGGCGG CGGGCGCGAT CCAGGCTTCG
GCCATGTATG TGCCGATCCT GGTGCTGGTC TTCATCGGGG CGTTCACGAA ATCCGCGCAA
TTTCCCTTCC ACTTCTGGTT GCCGGGGGCC ATGGCGGCCC CGACGCCCGT GAGCGCTTAT
CTGCACTCGG CAACCATGGT GAAGGCGGGG ATCTACCTGC TGGCGCGGTT CACCCCGGCC
TTGGGCGGCA CGGAAGTGTG GTTCTGGATC CTGACCATCG TCGGTGCGAT CACCATGGTC
TGGAGTTCGG TGCTCGCGCT CAAGCAGACC GACCTGAAGC TGATGCTCGC CTATACCACG
GTCATGGCAC TTGGCGCGCT GACCATGATG CTGGGTGGCG GGACGCGTTA CGCGGTGATG
ACCGTTTCGG TCTTCCTGGT GGTGCACGCA CTTTACAAGG CCGCGCTGTT TCTCACCGTG
GGGCTCATCG ACAAGGGCAC CGGCACGCGG GAGGTCGGGC AACTCGGCGG GCTGCGACGG
GAAATGCCGA TCACCTTCTG GATCGCCATT CTGGCGGCCC TGTCCATGGC CGGCATGGCG
CCCTTTGTCG GCTTCATCGG CAAGGAGCTG ATGTACGAGG CCGCCCTCGG GGTCGAGACC
GAGCCGCTCT TCGTGGTGAC CGCGGCGCTC CTTGCCAATG CCAACATGGT GGCGGCGGCG
GCCCTCGTGG CGATCTCGCC CTTCTTCGGC GCGCGCGTTG CGCCGCCCAA GTCACCCGCG
GACCCGACCC CGTGGCTCTG GATCGGTCCG GCGCTCCTGG CGGCGCTGGG CCTTGCTTTC
GGGCTTGTGC CGGCCTTGAT CGATGGTCCG ATCATCACCC CGGTGGTGCA GTCCATCCTG
CCGGGCGAGG AGGCGGTGTA TCTCAAGCTC TGGCACGGGG TGAATCTGCC ACTGATGCTG
TCGATCCTGA CCTTTGCCCT GGGCTTTGCG CTCTATTACG GGCGGGACAA GATCCGCGGC
TCGCTGCAGA GCGCGAACTT CACCGGCGGG CTGGATGCCA ACGACACCTA CAATCTGCTT
CTGACCTCCT TCAAGCGCTT CGCGGCCTGG TCGGCGCGGA CCGTGCAGGG CGGCAAGATG
ACGGTCTATC TGCGCACGGC CTTCGCGGTG CTGGCACTTC TGATGTGGGG CGCGCACCTG
GCCTCGCGGG ATGCGTTCAA CCCGCCGGTC GAGGGCATCG CGCTGATCCC CATGGTGATC
TGCCTGTTGA TCGCGGTGTC GGCGGCGGTG GTGCTGACCA CGGGCTCGCG GCTCTACGGC
CTCACCGCCC TGGGCATCAC CGGGGCCGGG ATCGCGATCC TGTTCGTGTT CTATTCGGCC
ATCGATGTGG CCATCACCCA ACTGCTGGTC GAGATGCTGG TGGTGATCAT CCTCGCCGTG
GCGCTGGTCA AGCTGCCCAA CATGCCACGG GAGCCGAATT TCCGCGCCGG TGACGCGCTG
ATCGCCACGG CGCTCGGGCT GGGCGTGGCC TTCGTGGTCG CCTCGGTGCT GATGCAGCCC
TTCGATCCGC GTATCAACGA GTTTTTCAAC GCCGCAAGCT ACCCCGAGGC GCTGGGCCGC
AACGTGGTCA ACGTGATCCT GGTGGACTTC CGGGCGCTGG ATACCCTGGG CGAGGTGGCC
GTGGTGCTGG TCGCCGCGAT CTCGGCGGCG GCGGCCCTGA CCGCGGGGCT GCGTGCCGGG
CGAAAAGAGA AAGAAGAATG A
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| Protein sequence | MPRLLTLVPA ALMALTAAWF AQFIPQVASG EILTWSRPWI PGLDIEVAFL LDGLSMLFAL
MVTGIGAIIF LYSAVYFKGH PKLTMLLTLL FLFAVSMLGM VLADDMVTFF VFWEGTTITS
FLLVGFDHEK TKARDNALQA LLVTGLGGLA LLAGLILLGA EAGTFRISEM NAAAGAIQAS
AMYVPILVLV FIGAFTKSAQ FPFHFWLPGA MAAPTPVSAY LHSATMVKAG IYLLARFTPA
LGGTEVWFWI LTIVGAITMV WSSVLALKQT DLKLMLAYTT VMALGALTMM LGGGTRYAVM
TVSVFLVVHA LYKAALFLTV GLIDKGTGTR EVGQLGGLRR EMPITFWIAI LAALSMAGMA
PFVGFIGKEL MYEAALGVET EPLFVVTAAL LANANMVAAA ALVAISPFFG ARVAPPKSPA
DPTPWLWIGP ALLAALGLAF GLVPALIDGP IITPVVQSIL PGEEAVYLKL WHGVNLPLML
SILTFALGFA LYYGRDKIRG SLQSANFTGG LDANDTYNLL LTSFKRFAAW SARTVQGGKM
TVYLRTAFAV LALLMWGAHL ASRDAFNPPV EGIALIPMVI CLLIAVSAAV VLTTGSRLYG
LTALGITGAG IAILFVFYSA IDVAITQLLV EMLVVIILAV ALVKLPNMPR EPNFRAGDAL
IATALGLGVA FVVASVLMQP FDPRINEFFN AASYPEALGR NVVNVILVDF RALDTLGEVA
VVLVAAISAA AALTAGLRAG RKEKEE
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