| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0717 |
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| Symbol | |
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| ID | 5711152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 724680 |
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| End bp | 725906 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266625 |
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| Product | multidrug resistance protein |
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| Protein accession | YP_001532063 |
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| Protein GI | 159043269 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.29522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAC GCCCCGCCAG CCGCTTTCTT GACCGCAATA CCCCCCCGCA TCTGGCCACG
CTGGTGCTCA TGGCGGGGGT TGCCGCGCTG TCGATGAACG TGTTTTTGCC CTCCCTGCCG
GGCATGGCGG TCTATTTCGA TGCCGAGTAC GCGGTGATGC AGCTGTCGGT CTCGCTCTAC
CTGATGATGA CCGCCGTCTT GCAGCTGCTG GTGGGGCCGC TGTCGGATCG CTACGGGCGG
CGGCCGGTGA TGCTGATCTC TACGGCGCTG TTTGCCCTGG CGACCCTCGG GGCGATCTTC
GCACCGACGG TCGAGGTCTT CCTGGCCTGC CGCATGGCCC AGGCGGTGAT CGCCTCGGCC
CTGGTGCTGA GCCGGGCCAT CGTGCGCGAC ATGGTGGGGC AGGCCGAGGC GGCCTCGCTG
ATCGGCTATG TCACCATGGG CATGGCGATC GTGCCGATGA TCGGCCCCGC CCTCGGCGGC
CTGCTGGATG AAACCTTCGG CTGGCGGGCG AGCTTCTGGC TGCTCTTTGC CGCTGCCGTC
GCGATGCTCT GGCTGATCTG GAGCGACCTG GGCGAGACCG CACCCAACCG TTCGGGCGGC
TTCCGGGCGC AGGTCGCGGA ATATCCCGAA CTGCTCAAGG CCCGGCGTTT CTGGGGCTAT
GTCGCCGCGG CCGCCTTTGC ATCGGGCGTC TTTTTCGCCT TCCTGGGCGG TGCGCCCTAT
CTCGGCTCCG AGGTGTTCGG GCTCAGCCCC GCCATTCTCG GAATCTATTT CGGGGCGCCT
GCGCTCGGCT ACGTGCTCGG CAATTTCCTG TCGGGCCGGT TCTCCATCCG CATCGGGATC
AATCGCATGA TCCTCTGGGG TTCGCTCATC ACCTCGGTGG GCATGGCGGC GTCGATCCTG
ATCTATGCCG CCGGTCTGAC CCATCCGCTG AGCTTTTTTG CCCTGACCGC CACGGTGGGG
ATCGGCAACG GCATGATCAT CCCCAACGCC ACCGCGGGCA GCCTGTCGGT GCGTCCGCAC
CTGGCCGGCA CCGCCAGCGG GCTGGGTGGC GCGATCATGG TGGGCGGCGG CGCGGCCATG
TCGGTGCTGG CGGGCATCCT TCTGCCGCTG GGCACCGGGC CCTACCCGCT GCAGGCACTG
ATGCTTCTGA CCTCGCTCGG CTCCACTGTC GCGGTGATCT ACGTGATGCG CCGGGAGCGC
GACCTGACCG CCCAGCCCAG CGCCTGA
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| Protein sequence | MTKRPASRFL DRNTPPHLAT LVLMAGVAAL SMNVFLPSLP GMAVYFDAEY AVMQLSVSLY
LMMTAVLQLL VGPLSDRYGR RPVMLISTAL FALATLGAIF APTVEVFLAC RMAQAVIASA
LVLSRAIVRD MVGQAEAASL IGYVTMGMAI VPMIGPALGG LLDETFGWRA SFWLLFAAAV
AMLWLIWSDL GETAPNRSGG FRAQVAEYPE LLKARRFWGY VAAAAFASGV FFAFLGGAPY
LGSEVFGLSP AILGIYFGAP ALGYVLGNFL SGRFSIRIGI NRMILWGSLI TSVGMAASIL
IYAAGLTHPL SFFALTATVG IGNGMIIPNA TAGSLSVRPH LAGTASGLGG AIMVGGGAAM
SVLAGILLPL GTGPYPLQAL MLLTSLGSTV AVIYVMRRER DLTAQPSA
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